https://github.com/peterajhgraham/metabolic_pathway_gnn

A Julia-based Graph Neural Network (GNN) model developed for the use case of analyzing and predicting outcomes within metabolic pathways in various biological systems.
https://github.com/peterajhgraham/metabolic_pathway_gnn

computational-molecular-biology graph-neural-networks metabolic-systems

Last synced: 14 days ago
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A Julia-based Graph Neural Network (GNN) model developed for the use case of analyzing and predicting outcomes within metabolic pathways in various biological systems.

• Host: GitHub
• URL: https://github.com/peterajhgraham/metabolic_pathway_gnn
• Owner: peterajhgraham
• Created: 2024-08-25T17:43:07.000Z (3 months ago)
• Default Branch: main
• Last Pushed: 2024-08-25T20:17:45.000Z (3 months ago)
• Last Synced: 2024-08-26T19:23:25.432Z (3 months ago)
• Topics: computational-molecular-biology, graph-neural-networks, metabolic-systems
• Language: Julia
• Homepage:
• Size: 13.7 KB
• Stars: 0
• Watchers: 1
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# Graph Neural Networks for Metabolic Pathway Prediction

This project implements a Graph Neural Network in Julia for analyzing and predicting outcomes within metabolic pathways.

## Directory Structure

```

Metabolic_Pathway_GNN/

├── src/

│   ├── data_preprocessing.jl

│   ├── gnn_model.jl

│   ├── train.jl

│   ├── evaluate.jl

│   └── Main.jl

│

├── Project.toml

├── .gitignore

└── README.md

```