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https://github.com/pezmaster31/bamtools
C++ API & command-line toolkit for working with BAM data
https://github.com/pezmaster31/bamtools
Last synced: 13 days ago
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C++ API & command-line toolkit for working with BAM data
- Host: GitHub
- URL: https://github.com/pezmaster31/bamtools
- Owner: pezmaster31
- License: mit
- Created: 2010-05-21T19:35:12.000Z (over 14 years ago)
- Default Branch: master
- Last Pushed: 2024-07-12T18:04:45.000Z (4 months ago)
- Last Synced: 2024-08-30T23:26:13.688Z (2 months ago)
- Language: C++
- Homepage:
- Size: 6.24 MB
- Stars: 414
- Watchers: 27
- Forks: 153
- Open Issues: 68
-
Metadata Files:
- Readme: README
- License: LICENSE
Awesome Lists containing this project
- Awesome-Bioinformatics - Bamtools - Collection of tools for working with BAM files. [ [paper-2011](https://academic.oup.com/bioinformatics/article/27/12/1691/255399) ] (Next Generation Sequencing / BAM File Utilities)
README
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README : BAMTOOLS
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BamTools provides both a programmer's API and an end-user's toolkit for handling
BAM files.
I. Learn More
II. License
III. Acknowledgements
IV. Contact
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I. Learn More:
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Installation steps, tutorial, API documentation, etc. are all now available
through the BamTools project wiki:
https://github.com/pezmaster31/bamtools/wiki
Join the mailing list(s) to stay informed of updates or get involved with
contributing:
https://github.com/pezmaster31/bamtools/wiki/Mailing-lists
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II. License :
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Both the BamTools API and toolkit are released under the MIT License.
Copyright (c) 2009-2010 Derek Barnett, Erik Garrison, Gabor Marth,
Michael Stromberg
See included file LICENSE for details.
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III. Acknowledgements :
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* Aaron Quinlan for several key feature ideas and bug fix contributions
* Baptiste Lepilleur for the public-domain JSON parser (JsonCPP)
* Heng Li, author of SAMtools - the original C-language BAM API/toolkit.
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IV. Contact :
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Feel free to contact me with any questions, comments, suggestions, bug reports,
etc.
Derek Barnett
Marth Lab
Biology Dept., Boston College
Email: [email protected]
Project Website: http://github.com/pezmaster31/bamtools