https://github.com/phac-nml/venae
A workflow to rapidly identify species and antimicrobial resistance genes in positive blood cultures sequenced using Oxford Nanopore Technologies (ONT)
https://github.com/phac-nml/venae
antimicrobial-resistance assembly bacteria bioinformatics fungi metagenomics nextflow pipelines public-health quality-control report
Last synced: 5 months ago
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A workflow to rapidly identify species and antimicrobial resistance genes in positive blood cultures sequenced using Oxford Nanopore Technologies (ONT)
- Host: GitHub
- URL: https://github.com/phac-nml/venae
- Owner: phac-nml
- License: apache-2.0
- Created: 2025-03-24T18:06:27.000Z (about 1 year ago)
- Default Branch: main
- Last Pushed: 2025-12-16T14:44:05.000Z (6 months ago)
- Last Synced: 2025-12-20T04:57:54.869Z (6 months ago)
- Topics: antimicrobial-resistance, assembly, bacteria, bioinformatics, fungi, metagenomics, nextflow, pipelines, public-health, quality-control, report
- Language: HTML
- Homepage:
- Size: 141 MB
- Stars: 1
- Watchers: 1
- Forks: 0
- Open Issues: 0
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Metadata Files:
- Readme: README.md
- Changelog: CHANGELOG.md
- Contributing: .github/CONTRIBUTING.md
- License: LICENSE
- Citation: CITATIONS.md
- Notice: NOTICE