https://github.com/phenopackets/hapi-pheno
FHIR Client for working with phenopackets
https://github.com/phenopackets/hapi-pheno
Last synced: 4 months ago
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FHIR Client for working with phenopackets
- Host: GitHub
- URL: https://github.com/phenopackets/hapi-pheno
- Owner: phenopackets
- License: gpl-3.0
- Created: 2022-01-20T06:28:17.000Z (over 4 years ago)
- Default Branch: main
- Last Pushed: 2024-03-14T16:57:43.000Z (about 2 years ago)
- Last Synced: 2024-04-17T16:18:28.154Z (about 2 years ago)
- Language: Java
- Homepage: http://phenopackets.org/hapi-pheno/
- Size: 2.84 MB
- Stars: 3
- Watchers: 3
- Forks: 0
- Open Issues: 3
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Metadata Files:
- Readme: README.md
- License: LICENSE
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README
# hapi-pheno-client
FHIR Client for working with phenopackets.
## Running this package: mvn spring-boot:run -pl hapipheno-client
The demo app is intended to be run together with a HAPI FHIR server that
has ingested the GA4GH [Phenopacket IG](http://phenopackets.org/core-ig/index.html).
This [repository](https://github.com/pnrobinson/hapi-pheno-server) contains a copy of the
HAPI FHIR JPA starter project that has been modified to ingest the Phenopacket IG.
By default it will start a server on localhost:8888, which is the location that this
client application will target by default.
## Testing
java -Xmx8G -jar validator_cli.jar myVariant.json -extension any -html-output MYVAR.html -version 4.0.1 -ig hl7.fhir.us.ga4gh.phenopacket#0.1.0