Ecosyste.ms: Awesome

An open API service indexing awesome lists of open source software.

Awesome Lists | Featured Topics | Projects

https://github.com/pinto0309/sna4onnx

Simple node addition tool for onnx. Simple Node Addition for ONNX.
https://github.com/pinto0309/sna4onnx

cli model-converter models onnx python

Last synced: 2 months ago
JSON representation

Simple node addition tool for onnx. Simple Node Addition for ONNX.

Awesome Lists containing this project

README

        

# sna4onnx
Simple node addition tool for onnx. **S**imple **N**ode **A**ddition for **ONNX**.

https://github.com/PINTO0309/simple-onnx-processing-tools

[![Downloads](https://static.pepy.tech/personalized-badge/sna4onnx?period=total&units=none&left_color=grey&right_color=brightgreen&left_text=Downloads)](https://pepy.tech/project/sna4onnx) ![GitHub](https://img.shields.io/github/license/PINTO0309/sna4onnx?color=2BAF2B) [![PyPI](https://img.shields.io/pypi/v/sna4onnx?color=2BAF2B)](https://pypi.org/project/sna4onnx/) [![CodeQL](https://github.com/PINTO0309/sna4onnx/workflows/CodeQL/badge.svg)](https://github.com/PINTO0309/sna4onnx/actions?query=workflow%3ACodeQL)



# Key concept
- [x] Combines the OP generated by **[sog4onnx](https://github.com/PINTO0309/sog4onnx)** with the specified output and input OPs.
- [x] Use a good combination with the ONNX merge tool **[snc4onnx](https://github.com/PINTO0309/snc4onnx)** while merging OP parts.
- [x] Only one OP can be extrapolated at a time.
- [x] After OP extrapolation, the entire model is checked, and even if there is a consistency problem, only a warning is displayed and the ONNX file is output as is.
- [x] Add unconnected input and output variables to the input/output OP of a graph.

## 1. Setup
### 1-1. HostPC
```bash
### option
$ echo export PATH="~/.local/bin:$PATH" >> ~/.bashrc \
&& source ~/.bashrc

### run
$ pip install -U onnx \
&& python3 -m pip install -U onnx_graphsurgeon --index-url https://pypi.ngc.nvidia.com \
&& pip install -U sna4onnx
```
### 1-2. Docker
https://github.com/PINTO0309/simple-onnx-processing-tools#docker

## 2. CLI Usage
```
$ sna4onnx -h

usage:
sna4onnx [-h]
-if INPUT_ONNX_FILE_PATH
-aot ADD_OP_TYPE
-aon ADD_OP_NAME
[-aoiv NAME TYPE VALUE]
[-aoov NAME TYPE VALUE]
[-aoa NAME DTYPE VALUE]
[-csoon SRCOP_NAME SRCOP_OUTPUT_NAME ADDOP_NAME ADDOP_INPUT_NAME]
-cdoin ADDOP_NAME ADDOP_OUTPUT_NAME DESTOP_NAME DESTOP_INPUT_NAME
[-of OUTPUT_ONNX_FILE_PATH]
[-n]

optional arguments:
-h, --help
show this help message and exit

-if INPUT_ONNX_FILE_PATH, --input_onnx_file_path INPUT_ONNX_FILE_PATH
Input onnx file path.

-aot ADD_OP_TYPE, --add_op_type ADD_OP_TYPE
ONNX OP type.
https://github.com/onnx/onnx/blob/main/docs/Operators.md

-aon ADD_OP_NAME, --add_op_name ADD_OP_NAME
Name of OP to be added.
e.g.
--add_op_name AddOP1

-aoiv ADD_OP_INPUT_VARIABLES ADD_OP_INPUT_VARIABLES ADD_OP_INPUT_VARIABLES, --add_op_input_variables ADD_OP_INPUT_VARIABLES ADD_OP_INPUT_VARIABLES ADD_OP_INPUT_VARIABLES
input_variables can be specified multiple times.
--add_op_input_variables variable_name numpy.dtype shape
https://github.com/onnx/onnx/blob/main/docs/Operators.md
e.g.
--add_op_input_variables inpname1 float32 [1,3,5,5]
--add_op_input_variables inpname2 int32 [1]
--add_op_input_variables inpname3 float64 [1,3,224,224]

-aoov ADD_OP_OUTPUT_VARIABLES ADD_OP_OUTPUT_VARIABLES ADD_OP_OUTPUT_VARIABLES, --add_op_output_variables ADD_OP_OUTPUT_VARIABLES ADD_OP_OUTPUT_VARIABLES ADD_OP_OUTPUT_VARIABLES
output_variables can be specified multiple times.
--add_op_output_variables variable_name numpy.dtype shape
https://github.com/onnx/onnx/blob/main/docs/Operators.md
e.g.
--add_op_output_variables outname1 float32 [1,3,5,5]
--add_op_output_variables outname2 int32 [1]
--add_op_output_variables outname3 float64 [1,3,224,224]

-aoa ADD_OP_ATTRIBUTES ADD_OP_ATTRIBUTES ADD_OP_ATTRIBUTES, --add_op_attributes ADD_OP_ATTRIBUTES ADD_OP_ATTRIBUTES ADD_OP_ATTRIBUTES
attributes can be specified multiple times.
--add_op_attributes name dtype value
dtype is one of "float32" or "float64" or "int32" or "int64" or "str".
https://github.com/onnx/onnx/blob/main/docs/Operators.md
e.g.
--add_op_attributes alpha float32 1.0
--add_op_attributes beta float32 1.0
--add_op_attributes transA int64 0
--add_op_attributes transB int64 0

-csoon CONNECTION_SRC_OP_OUTPUT_NAMES CONNECTION_SRC_OP_OUTPUT_NAMES CONNECTION_SRC_OP_OUTPUT_NAMES CONNECTION_SRC_OP_OUTPUT_NAMES, --connection_src_op_output_names CONNECTION_SRC_OP_OUTPUT_NAMES CONNECTION_SRC_OP_OUTPUT_NAMES CONNECTION_SRC_OP_OUTPUT_NAMES CONNECTION_SRC_OP_OUTPUT_NAMES
Specify the name of the output name from which to connect.
e.g.
-Before-
[OpA]oname1 - iname1[OpB]oname1
[OpC]oname1

-After-
[OpA]oname1 - iname1[AddOP1]oname1 - iname1[OpB]oname1
[OpC]oname1 - iname2[AddOP1]

When extrapolating a new OP between OpA and OpB.
--connection_src_op_output_names OpA oname1 AddOP1 iname1
--connection_src_op_output_names OpC oname1 AddOP1 iname2
This need not be specified only when the type of the newly added OP is Constant.

-cdoin CONNECTION_DEST_OP_INPUT_NAMES CONNECTION_DEST_OP_INPUT_NAMES CONNECTION_DEST_OP_INPUT_NAMES CONNECTION_DEST_OP_INPUT_NAMES, --connection_dest_op_input_names CONNECTION_DEST_OP_INPUT_NAMES CONNECTION_DEST_OP_INPUT_NAMES CONNECTION_DEST_OP_INPUT_NAMES CONNECTION_DEST_OP_INPUT_NAMES
Specify the name of the input name from which to connect.
e.g.
-Before-
[OpA]oname1 - iname1[OpB]oname1
[OpC]oname1

-After-
[OpA]oname1 - iname1[AddOP1]oname1 - iname1[OpB]oname1
[OpC]oname1 - iname2[AddOP1]

When extrapolating a new OP between OpA and OpB.
--connection_dest_op_input_names AddOP1 oname1 OpB iname1

-of OUTPUT_ONNX_FILE_PATH, --output_onnx_file_path OUTPUT_ONNX_FILE_PATH
Output onnx file path.
If not specified, a file with "_mod" appended to the end of input_onnx_file_path is output.
e.g.
aaa.onnx -> aaa_mod.onnx

-n, --non_verbose
Do not show all information logs. Only error logs are displayed.
```

## 3. In-script Usage
```python
>>> from sna4onnx import add
>>> help(add)

Help on function add in module sna4onnx.onnx_operation_adder:

add(
connection_src_op_output_names: List,
connection_dest_op_input_names: List,
add_op_type: str, add_op_name: str,
add_op_input_variables: Union[dict, NoneType] = None,
add_op_output_variables: Union[dict, NoneType] = None,
add_op_attributes: Union[dict, NoneType] = None,
input_onnx_file_path: Union[str, NoneType] = '',
onnx_graph: Union[onnx.onnx_ml_pb2.ModelProto, NoneType] = None,
output_onnx_file_path: Union[str, NoneType] = '',
non_verbose: Union[bool, NoneType] = False
) -> onnx.onnx_ml_pb2.ModelProto

Parameters
----------
connection_src_op_output_names: List
Specify the name of the output name from which to connect.

e.g.
-Before-
[OpA] outnameA - inpnameB1 [OpB] outnameB
[OpC] outnameC
-After-
[OpA] outnameA - inpname1 [AddOP1] outname1 - inpnameB1 [OpB] outnameB
[OpC] outnameC - inpname2 [AddOP1]
When extrapolating a new OP between OpA and OpB.
connection_src_op_output_names = [
["OpA", "outnameA", "AddOP1", "inpname1",],
["OpC", "outnameC", "AddOP1", "inpname2",],
]

This need not be specified only when the type of the newly added OP is Constant.

connection_dest_op_input_names: List
Specify the name of the input name from which to connect.

e.g.
-Before-
[OpA] outnameA - inpnameB1 [OpB] outnameB
[OpC] outnameC
-After-
[OpA] outnameA - inpname1 [AddOP1] outname1 - inpnameB1 [OpB] outnameB
[OpC] outnameC - inpname2 [AddOP1]
When extrapolating a new OP between OpA and OpB.
connection_dest_op_input_names = [
["AddOP1", "outname1", "OpB", "inpnameB1"],
]

add_op_type: str
ONNX op type.
See below for the types of OPs that can be specified.

e.g. "Add", "Div", "Gemm", ...
https://github.com/onnx/onnx/blob/main/docs/Operators.md

add_op_name: str
Name of OP to be added.

e.g. --add_op_name AddOP1

add_op_input_variables: Optional[dict]
Specify input variables for the OP to be generated.
See below for the variables that can be specified.

{
"input_var_name1": [numpy.dtype, shape],
"input_var_name2": [numpy.dtype, shape],
...
}

e.g.
add_op_input_variables = {
"inpname1": [np.float32, [1,224,224,3]],
"inpname2": [np.bool_, [0]],
...
}
https://github.com/onnx/onnx/blob/main/docs/Operators.md

add_op_output_variables: Optional[dict]
Specify output variables for the OP to be generated.
See below for the variables that can be specified.

{
"output_var_name1": [numpy.dtype, shape],
"output_var_name2": [numpy.dtype, shape],
...
}

e.g.
add_op_output_variables = {
"outname1": [np.float32, [1,224,224,3]],
"outname2": [np.bool_, [0]],
...
}
https://github.com/onnx/onnx/blob/main/docs/Operators.md

add_op_attributes: Optional[dict]
Specify output add_op_attributes for the OP to be generated.
See below for the add_op_attributes that can be specified.

{
"attr_name1": value1,
"attr_name2": value2,
"attr_name3": value3,
...
}

e.g.
add_op_attributes = {
"alpha": 1.0,
"beta": 1.0,
"transA": 0,
"transB": 0,
}
Default: None
https://github.com/onnx/onnx/blob/main/docs/Operators.md

input_onnx_file_path: Optional[str]
Input onnx file path.
Either input_onnx_file_path or onnx_graph must be specified.
Default: ''

onnx_graph: Optional[onnx.ModelProto]
onnx.ModelProto.
Either input_onnx_file_path or onnx_graph must be specified.
onnx_graph If specified, ignore input_onnx_file_path and process onnx_graph.

output_onnx_file_path: Optional[str]
Output onnx file path. If not specified, no ONNX file is output.
Default: ''

non_verbose: Optional[bool]
Do not show all information logs. Only error logs are displayed.
Default: False

Returns
-------
changed_graph: onnx.ModelProto
Changed onnx ModelProto.
```

## 4. CLI Execution
```bash
$ sna4onnx \
--input_onnx_file_path crestereo_init_iter2_120x160.onnx \
--connection_src_op_output_name Sub_451 onnx::Pow_603 dummy_mul inp1 \
--connection_dest_op_input_name dummy_mul out1 Div_458 onnx::Pow_603 \
--add_op_type Mul \
--add_op_name dummy_mul \
--add_op_input_variables inp1 float32 [1,70,256] \
--add_op_input_variables inp2_const float32 [1] \
--add_op_output_variables out1 float32 [1,70,256] \
--output_onnx_file_path test.onnx
```

## 5. In-script Execution
```python
from sna4onnx import add

onnx_graph = add(
input_onnx_file_path="crestereo_init_iter2_120x160.onnx",
connection_src_op_output_names=[
["Sub_451", "onnx::Pow_603", "dummy_mul", "inp1"],
],
connection_dest_op_input_names=[
["dummy_mul","out1", "Div_458", "onnx::Pow_603"],
],
add_op_type="Mul",
add_op_name="dummy_mul",
add_op_input_variables={
"inp1": [np.float32, [1,70,256]],
"inp2_const": [np.float32, [1]],
},
add_op_output_variables={
"out1": [np.float32, [1,70,256]],
},
)

# or

onnx_graph = add(
onnx_graph=graph,
connection_src_op_output_names=[
["Sub_451", "onnx::Pow_603", "dummy_mul", "inp1"],
],
connection_dest_op_input_names=[
["dummy_mul","out1", "Div_458", "onnx::Pow_603"],
],
add_op_type="Mul",
add_op_name="dummy_mul",
add_op_input_variables={
"inp1": [np.float32, [1,70,256]],
"inp2_const": [np.float32, [1]],
},
add_op_output_variables={
"out1": [np.float32, [1,70,256]],
},
)
```

## 6. Sample
### Before
![20220426234631](https://user-images.githubusercontent.com/33194443/165336928-066542b7-89ad-4c51-9e10-6bb2e8e6344a.png)

### After
![image](https://user-images.githubusercontent.com/33194443/165440616-d9947caa-ba7d-4f83-9d97-d71be0d3a579.png)

## 7. Reference
1. https://github.com/onnx/onnx/blob/main/docs/Operators.md
2. https://docs.nvidia.com/deeplearning/tensorrt/onnx-graphsurgeon/docs/index.html
3. https://github.com/NVIDIA/TensorRT/tree/main/tools/onnx-graphsurgeon
4. https://github.com/PINTO0309/simple-onnx-processing-tools
5. https://github.com/PINTO0309/PINTO_model_zoo

## 8. Issues
https://github.com/PINTO0309/simple-onnx-processing-tools/issues