https://github.com/poisotlab/econetworkslabs

Computer labs and notebooks for the upcoming book "Practical Analysis of Ecological Networks"
https://github.com/poisotlab/econetworkslabs

ecological-network ecology jupyter-notebook open-educational-resources

Last synced: 23 days ago
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Computer labs and notebooks for the upcoming book "Practical Analysis of Ecological Networks"

• Host: GitHub
• URL: https://github.com/poisotlab/econetworkslabs
• Owner: PoisotLab
• Created: 2019-09-09T13:18:10.000Z (almost 7 years ago)
• Default Branch: master
• Last Pushed: 2019-11-12T02:01:36.000Z (over 6 years ago)
• Last Synced: 2024-05-02T06:13:34.151Z (about 2 years ago)
• Topics: ecological-network, ecology, jupyter-notebook, open-educational-resources
• Language: Jupyter Notebook
• Homepage:
• Size: 158 KB
• Stars: 2
• Watchers: 3
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

          
# Practical Analysis of Ecological Networks

This repository contains a series of notebooks corresponding to the chapter of the in progress "Practical Analysis of Ecological Networks", and the lessons of the BIO3043/BIO6037 class at the Université de Montréal

## How to use the lessons

[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/PoisotLab/EcoNetworksLabs/master)

## Plan

| Section | Title                                | Main concepts | Launch |

|:-------:| ------------------------------------ | ------------- |:------:|

|    1    | Link-species scaling law             |               |        |

|    2    | Connectance and degree distribution  |               |   [:arrow_forward:](https://mybinder.org/v2/gh/PoisotLab/EcoNetworksLabs/master?filepath=02_connectance_degree.ipynb)     |

|    3    | Motifs and centrality                |               |    [:arrow_forward:](https://mybinder.org/v2/gh/PoisotLab/EcoNetworksLabs/master?filepath=03_motifs.ipynb)    |

|    4    | Nestedness                           |               |        |

|    5    | Modularity                           |               |        |

|    6    | Null hypothesis significance testing |               |   [:arrow_forward:](https://mybinder.org/v2/gh/PoisotLab/EcoNetworksLabs/master?filepath=06_nhst.ipynb)     |

|    7    | Comparing networks                   |               |   [:arrow_forward:](https://mybinder.org/v2/gh/PoisotLab/EcoNetworksLabs/master?filepath=07_comparisons.ipynb)     |

|    8    | Probabilistic networks               |               |        |