https://github.com/polusai/napari-bfio

bfio plugin for napari
https://github.com/polusai/napari-bfio

Last synced: about 1 year ago
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bfio plugin for napari

• Host: GitHub
• URL: https://github.com/polusai/napari-bfio
• Owner: PolusAI
• License: mit
• Created: 2023-08-17T14:47:06.000Z (almost 3 years ago)
• Default Branch: main
• Last Pushed: 2023-09-25T19:44:33.000Z (over 2 years ago)
• Last Synced: 2025-05-27T13:57:10.380Z (about 1 year ago)
• Language: Python
• Homepage:
• Size: 24.4 KB
• Stars: 1
• Watchers: 5
• Forks: 2
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

          
# napari-bfio

[![License MIT](https://img.shields.io/pypi/l/napari-bfio.svg?color=green)](https://github.com/PolusAI/napari-bfio/raw/main/LICENSE)

[![PyPI](https://img.shields.io/pypi/v/napari-bfio.svg?color=green)](https://pypi.org/project/napari-bfio)

[![Python Version](https://img.shields.io/pypi/pyversions/napari-bfio.svg?color=green)](https://python.org)

[![tests](https://github.com/PolusAI/napari-bfio/workflows/tests/badge.svg)](https://github.com/PolusAI/napari-bfio/actions)

[![codecov](https://codecov.io/gh/PolusAI/napari-bfio/branch/main/graph/badge.svg)](https://codecov.io/gh/PolusAI/napari-bfio)

[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-bfio)](https://napari-hub.org/plugins/napari-bfio)

A plugin to read and write images using bfio within napari

----------------------------------

This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template.

## Installation

You can install `napari-bfio` via [pip]:

    pip install napari-bfio

`napari-bfio` depends on `bfio` package to read/write the data. By default, `bfio` package and the core dependencies (numpy, tifffile, imagecodecs, scyjava) are installed during the installation process of `napari-bfio`.

To install latest development version :

    pip install git+https://github.com/PolusAI/napari-bfio.git

## Contributing

Contributions are very welcome. Tests can be run with [tox], please ensure

the coverage at least stays the same before you submit a pull request.

## License

Distributed under the terms of the [MIT] license,

"napari-bfio" is free and open source software

## Issues

If you encounter any problems, please [file an issue] along with a detailed description.

[napari]: https://github.com/napari/napari

[Cookiecutter]: https://github.com/audreyr/cookiecutter

[@napari]: https://github.com/napari

[MIT]: http://opensource.org/licenses/MIT

[BSD-3]: http://opensource.org/licenses/BSD-3-Clause

[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt

[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt

[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0

[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt

[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin

[file an issue]: https://github.com/PolusAI/napari-bfio/issues

[napari]: https://github.com/napari/napari

[tox]: https://tox.readthedocs.io/en/latest/

[pip]: https://pypi.org/project/pip/

[PyPI]: https://pypi.org/