https://github.com/predictiveecology/wbi_forecasts
https://github.com/predictiveecology/wbi_forecasts
Last synced: over 1 year ago
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- Host: GitHub
- URL: https://github.com/predictiveecology/wbi_forecasts
- Owner: PredictiveEcology
- License: gpl-3.0
- Created: 2020-09-18T00:30:00.000Z (almost 6 years ago)
- Default Branch: main
- Last Pushed: 2023-10-12T07:47:53.000Z (almost 3 years ago)
- Last Synced: 2023-10-13T00:38:11.801Z (almost 3 years ago)
- Language: R
- Size: 835 KB
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
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README
# WBI_forecasts
## Getting started
### Getting the code
All modules are written in R and all model code was developed collaboratively using GitHub (), with each module contained in its own git repository (see below).
Code that is shared among modules was bundled into R packages, and hosted in open git repositories.
All package code is automatically and regularly tested using cross-platform continuous integration frameworks to ensure the code is reliable and free of errors.
```bash
git clone --recurse-submodules -j8 https://github.com/PredictiveEcology/WBI_forecasts
```
**NOTE:** you will need access to each of the following repositories:
#### Modules
##### study area
- [PredictiveEcology/WBI_dataPrep_studyArea](https://github.com/PredictiveEcology/WBI_dataPrep_studyArea)
##### climate data
- [PredictiveEcology/canClimateData](https://github.com/PredictiveEcology/canClimateData)
##### LandR Biomass
- [PredictiveEcology/Biomass_borealDataPrep](https://github.com/PredictiveEcology/Biomass_borealDataPrep)
- [PredictiveEcology/Biomass_core](https://github.com/PredictiveEcology/Biomass_core)
- [PredictiveEcology/Biomass_regeneration](https://github.com/PredictiveEcology/Biomass_regeneration)
- [PredictiveEcology/Biomass_speciesData](https://github.com/PredictiveEcology/Biomass_speciesData)
- [PredictiveEcology/Biomass_speciesFactorial](https://github.com/PredictiveEcology/Biomass_speciesFactorial)
- [PredictiveEcology/Biomass_speciesParameters](https://github.com/PredictiveEcology/Biomass_speciesParameters)
- [PredictiveEcology/Biomass_yieldTables](https://github.com/PredictiveEcology/Biomass_yieldTables)
- [ianmseddy/gmcsDataPrep](https://github.com/ianmseddy/gmcsDataPrep)
##### fireSense
- [PredictiveEcology/fireSense](https://github.com/PredictiveEcology/fireSense)
- [PredictiveEcology/fireSense_EscapeFit](https://github.com/PredictiveEcology/fireSense_EscapeFit)
- [PredictiveEcology/fireSense_EscapePredict](https://github.com/PredictiveEcology/fireSense_EscapePredict)
- [PredictiveEcology/fireSense_IgnitionFit](https://github.com/PredictiveEcology/fireSense_IgnitionFit)
- [PredictiveEcology/fireSense_IgnitionPredict](https://github.com/PredictiveEcology/fireSense_IgnitionPredict)
- [PredictiveEcology/fireSense_SpreadFit](https://github.com/PredictiveEcology/fireSense_SpreadFit)
- [PredictiveEcology/fireSense_SpreadPredict](https://github.com/PredictiveEcology/fireSense_SpreadPredict)
- [PredictiveEcology/fireSense_dataPrepFit](https://github.com/PredictiveEcology/fireSense_dataPrepFit)
- [PredictiveEcology/fireSense_dataPrepPredict](https://github.com/PredictiveEcology/fireSense_dataPrepPredict)
##### birds
- [tati-micheletti/birdsNWT](https://github.com/tati-micheletti/birdsNWT)
##### caribou
- [tati-micheletti/caribouPopGrowthModel](https://github.com/tati-micheletti/caribouPopGrowthModel)
### Prerequisites
First, verify your installation of package development tools by running:
```{r has_devel}
install.packages('devtools')
devtools::has_devel()
```
The code is mostly self-sufficient: additional packages than those below are needed, but will be installed automatically.
See `01-packages.R` to see which additional packages will be used.