https://github.com/public-health-scotland/qpi-dashboard

Processing of Quality Performance Indicators data, as part of the National Cancer Quality Programme (Scotland).
https://github.com/public-health-scotland/qpi-dashboard

Last synced: 5 days ago
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Processing of Quality Performance Indicators data, as part of the National Cancer Quality Programme (Scotland).

• Host: GitHub
• URL: https://github.com/public-health-scotland/qpi-dashboard
• Owner: Public-Health-Scotland
• Created: 2023-05-11T12:41:35.000Z (over 1 year ago)
• Default Branch: main
• Last Pushed: 2024-11-06T16:49:39.000Z (7 days ago)
• Last Synced: 2024-11-06T17:43:31.334Z (7 days ago)
• Language: R
• Homepage: https://publichealthscotland.scot/our-areas-of-work/health-and-wellbeing/cancer/cancer-quality-performance-indicators-qpis/overview/
• Size: 6.72 MB
• Stars: 2
• Watchers: 2
• Forks: 0
• Open Issues: 4
• Metadata Files:
  • Readme: README.md

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README

        
# *qpi-dashboard*

*Repository to update the Scottish Cancer QPIs Dashboard (Tableau)*

### Directories

  * /code - R scripts required for project

    + `housekeeping.R` - contains all values which need to be changed each time

    + `functions.R` - functions sourced and used in the other script(s)

    + `packages.R` - list of packages sourced and used in the other script(s) 

    + `create_lookup.R` - compile the list of QPI names and targets

    + `create_templates.R` 

    + `check_submissions.R` 

    + `hb_hosp_qpi.R` - updates the Excel file containing the data, for feeding into Tableau

    + `age_gender.R` - process the demographic data

    + `case_asc.R` - process the case ascertainment data

    + `change_qpi_names.R`

    + `change_hospital_names.R`

    + `late_lookup_edits.R`

  * /renv - Required for renv. Don't need to interact directly 

  * /docs - documentation

  * /for_summary_table - script, input and templates to generate table for summary publication

    + `generate_summary_in_excel.R` - pivots the rows to show perf by year

    + `Scotland_rows_no_comments.xlsx` - input, containing Scotland-level performance data (ignored by git of course, rightly so)

    + `qpi_summary_table_plain.xlsx` - pivoted qpi table with no highlighting (ignored by git)

    + `qpi_summary_table.xlsx` - pivoted table with 'target met' column and colour highlighting (ignored by git)

  * /qpi_background_data_updates - for automatically collating demographic data for dashboard 'Background' tab

### Files

  * `renv.lock` - List of packages for use with renv

  * `.Rprofile` - R profile settings

  * `.gitignore` - tells git what files and folders *not* to track or upload to GitHub

  * `README.md` - this page

  * `QPI-dashboard.Proj` - R project

  

## How to use

Please see the SOP in the /docs folder.