https://github.com/python-microscopy/python-microscopy

The python-microscopy environment - an open-source package for light microscopy
https://github.com/python-microscopy/python-microscopy

Last synced: 2 months ago
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The python-microscopy environment - an open-source package for light microscopy

• Host: GitHub
• URL: https://github.com/python-microscopy/python-microscopy
• Owner: python-microscopy
• License: gpl-3.0
• Created: 2019-11-28T02:12:28.000Z (about 5 years ago)
• Default Branch: master
• Last Pushed: 2024-10-25T01:41:35.000Z (3 months ago)
• Last Synced: 2024-11-09T21:20:56.134Z (2 months ago)
• Language: Python
• Homepage: http://www.python-microscopy.org
• Size: 147 MB
• Stars: 84
• Watchers: 9
• Forks: 25
• Open Issues: 155
• Metadata Files:
  • Readme: README.md
  • Changelog: CHANGELOG.md
  • Contributing: docs/Contributing.rst
  • License: COPYING
  • Code of conduct: CODE_OF_CONDUCT.md
  • Support: docs/supported_hardware.rst
  • Roadmap: roadmap.rst

Awesome Lists containing this project

• awesome-biological-image-analysis - PYME - Open-source application suite for light microscopy acquisition, data storage, visualization, and analysis. (General image analysis software)

README

        
#  The PYthon Microscopy Environment

![tag](https://img.shields.io/github/v/tag/python-microscopy/python-microscopy?sort=semver&logo=github)

[![DOI](https://zenodo.org/badge/224552047.svg)](https://zenodo.org/badge/latestdoi/224552047)

![commits](https://img.shields.io/github/commit-activity/m/python-microscopy/python-microscopy?logo=github)

![testing](https://img.shields.io/azure-devops/tests/davidbaddeleynz/pyme-ci/2/master?logo=azuredevops)

PYME (the PYthon Microscopy Environment) is an open-source application suite for light microscopy acquisition, data storage, visualization, and analysis. It offers a particularly comprehensive set of features for single-molecule localization techniques (PALM, STORM, PAINT, etc ...), but also supports many other modalities. The package is multi-platform, running on Windows, Linux, and OSX.

- **Website:** https://www.python-microscopy.org

- **Installation:** https://python-microscopy.org/doc/Installation/Installation.html

- **Documentation:** https://python-microscopy.org/doc/

- **Source code:** https://github.com/python-microscopy/python-microscopy/

- **Contributing:** https://python-microscopy.org/doc/Contributing.html

- **Bug reports:** https://github.com/python-microscopy/python-microscopy/issues

The documentation is also available in the *docs* subdirectory of the repository.

**Have a question?** Get in touch! \

You can email us at [email protected], or raise a [support issue](https://github.com/python-microscopy/python-microscopy/issues/new?assignees=&labels=support&template=support.md&title=%5BSUPPORT%5D). We are also active on the [image.sc forum](https://forum.image.sc/) - tag your post with `pyme` and we'll be happy to support you.