https://github.com/quantixed/imagej-macros
quantixed FIJI update site
https://github.com/quantixed/imagej-macros
figure-maker fiji fiji-macro imagej imagej-macros tiff
Last synced: 14 days ago
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quantixed FIJI update site
- Host: GitHub
- URL: https://github.com/quantixed/imagej-macros
- Owner: quantixed
- Created: 2015-07-31T11:56:26.000Z (over 10 years ago)
- Default Branch: master
- Last Pushed: 2024-10-31T11:03:45.000Z (about 1 year ago)
- Last Synced: 2025-01-12T12:45:27.576Z (about 1 year ago)
- Topics: figure-maker, fiji, fiji-macro, imagej, imagej-macros, tiff
- Language: ImageJ Macro
- Homepage:
- Size: 13.9 MB
- Stars: 16
- Watchers: 8
- Forks: 2
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
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README
# imagej-macros
[](https://doi.org/10.5281/zenodo.18172496)
Tools for Fiji/ImageJ that we use in the lab for making figures etc.
## Instructions
For instuctions, please refer to the [wiki](https://github.com/quantixed/imagej-macros/wiki).
Main topics:
* [Figure Maker](https://github.com/quantixed/imagej-macros/wiki/Figure-Maker)
* [How to use the other tools](https://github.com/quantixed/imagej-macros/wiki/Other-Utilities-and-Helpful-Routines)
* [Troubleshooting](https://github.com/quantixed/imagej-macros/wiki/Troubleshooting)
## Installation
These tools are available via the *quantixed* ImageJ [update site](http://sites.imagej.net/Quantixed/).
Instructions for how to follow a 3rd party update site are [here](http://imagej.net/How_to_follow_a_3rd_party_update_site).
This is the best way to install these macros and maintain the latest versions.
If you want to install manually, add the contents of `macros` and `scripts` to the corresponding directories in your Fiji/ImageJ installation.
After installation, all macros can be found under the menu item called **LabCode**.
Release notes
## v1.0.2
- CHange Montage Merge: LUT conversion now does not rely on other update sites.
- Inclusion of OFP luts with `q_` prefix.
- Fix for Change Montage Merge so that montage(s) stay open for inspection after the change.
## v1.0.1
- Major change to `Crop_Stack_XYCT.ijm`
## v1.0.0
- Initial version for release