https://github.com/r-spatialecology/spectre

https://github.com/r-spatialecology/spectre

Last synced: about 1 month ago
JSON representation

• Host: GitHub
• URL: https://github.com/r-spatialecology/spectre
• Owner: r-spatialecology
• License: other
• Created: 2019-05-08T10:43:55.000Z (about 6 years ago)
• Default Branch: main
• Last Pushed: 2025-02-11T08:17:08.000Z (4 months ago)
• Last Synced: 2025-04-19T00:50:58.355Z (about 1 month ago)
• Language: C++
• Homepage: https://r-spatialecology.github.io/spectre/
• Size: 15.7 MB
• Stars: 8
• Watchers: 3
• Forks: 1
• Open Issues: 4
• Metadata Files:
  • Readme: README.Rmd
  • Contributing: CONTRIBUTING.md
  • License: LICENSE.md
  • Code of conduct: CODE_OF_CONDUCT.md

Awesome Lists containing this project

README

        
---

output: 

    github_document:

      html_preview: false

editor_options: 

  chunk_output_type: console

---

```{r, include = FALSE}

knitr::opts_chunk$set(

  collapse = TRUE,

  comment = "#>",

  fig.path = "man/figures/README-",

  out.width = "100%"

)

```

# spectre 

| Development | CI | CRAN | License |

|---|---|---|---|

| [![Project Status](https://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/#active) | [![R-CMD-check](https://github.com/r-spatialecology/spectre/actions/workflows/r-cmd-check.yml/badge.svg)](https://github.com/r-spatialecology/spectre/actions/workflows/r-cmd-check.yml) | [![CRAN status](https://www.r-pkg.org/badges/version/spectre)](https://CRAN.R-project.org/package=spectre) | [![License: GPL v3](https://img.shields.io/badge/License-GPLv3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0) |

| [![Lifecycle: stable](https://img.shields.io/badge/lifecycle-stable-brightgreen.svg)](https://lifecycle.r-lib.org/articles/stages.html#stable) | [![Codecov test coverage](https://codecov.io/gh/r-spatialecology/spectre/graph/badge.svg)](https://app.codecov.io/gh/r-spatialecology/spectre) | [![CRAN logs](https://cranlogs.r-pkg.org/badges/grand-total/spectre)](https://CRAN.R-project.org/package=spectre) | [![DOI](https://img.shields.io/badge/DOI-10.1111/ecog.06272-blue.svg)](https://doi.org/10.1111/ecog.06272) |

The goal of `spectre` is to provide an open source tool capable of predicting regional community composition at fine spatial resolutions using only sparse biological and environmental data. 

## Installation

Install the release version from CRAN:

```{r, eval=FALSE}

install.packages("spectre")

```

To install the developmental version of `spectre`, use:

```{r, eval=FALSE}

install.packages("remotes")

remotes::install_github("r-spatialecology/spectre")

```

A full use case example is included in the "Getting started with spectre" vignette associated with the package.

## Meta

- Please [report any issues or bugs](https://github.com/r-spatialecology/spectre/issues/new).

- Get citation information for `spectre` in R doing `citation(package = 'spectre')`

## Code of Conduct

Please note that the **spectre** package is released with a [Contributor Code of Conduct](CODE_OF_CONDUCT.md). By contributing to this project, you agree to abide by its terms.

To see how to contribute to this project, please see the [Contributing guidelines](CONTRIBUTING.md).