https://github.com/raamana/pyradigm

Research data management in biomedical and machine learning applications
https://github.com/raamana/pyradigm

automation biomedical data-integration data-structures datascience datastructures machine-learning machine-learning-workflows medical-data neuroimaging neuroinformatics neuroscience pandas python userfriendly workflow

Last synced: 3 months ago
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Research data management in biomedical and machine learning applications

• Host: GitHub
• URL: https://github.com/raamana/pyradigm
• Owner: raamana
• License: mit
• Created: 2016-05-18T05:27:45.000Z (about 9 years ago)
• Default Branch: master
• Last Pushed: 2023-03-27T17:04:00.000Z (over 2 years ago)
• Last Synced: 2025-03-26T23:04:21.340Z (4 months ago)
• Topics: automation, biomedical, data-integration, data-structures, datascience, datastructures, machine-learning, machine-learning-workflows, medical-data, neuroimaging, neuroinformatics, neuroscience, pandas, python, userfriendly, workflow
• Language: Python
• Homepage: http://raamana.github.io/pyradigm/
• Size: 7.25 MB
• Stars: 29
• Watchers: 5
• Forks: 12
• Open Issues: 16
• Metadata Files:
  • Readme: README.md
  • Contributing: CONTRIBUTING.md
  • License: LICENSE.txt
  • Code of conduct: CODE_OF_CONDUCT.md

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README

        
# CSVs suck. Upgrade your life with pyradigm for research data management in biomedical and machine learning applications 

[![status](http://joss.theoj.org/papers/c5c231486d699bca982ca7ebd9cf32d2/status.svg)](http://joss.theoj.org/papers/c5c231486d699bca982ca7ebd9cf32d2)

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[![Codacy Badge](https://api.codacy.com/project/badge/Grade/cffd80f290544e2e824011bfccf35ff8)](https://www.codacy.com/app/raamana/pyradigm?utm_source=github.com&utm_medium=referral&utm_content=raamana/pyradigm&utm_campaign=Badge_Grade)

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[![Python versions](https://img.shields.io/badge/python-2.7%2C%203.5%2C%203.6-blue.svg)]

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## Documentation

API and usage : http://raamana.github.io/pyradigm/

Demo notebook (no setup required) :

[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/raamana/pyradigm/master?filepath=docs%2Fusage.ipynb)

## Schematic

The illustration below describes the full functionality of `pyradigm` in the latest version `0.6`, for which docs will be updated shortly (see below illustration for docs on previous versions):

![flyer.png](docs/flyer.png)

The value of pyradigm is even more appreciated in the management of multi-modal feature sets, which becomes more efficient and easier to manage.

![multimodalflyer.png](docs/flyer_multimodal.png)

Usage/demo notebook (no setup required) :

[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/raamana/pyradigm/master?filepath=docs%2Fusage.ipynb)

Documentation : http://raamana.github.io/pyradigm/

**Name** : `pyradigm` roughly stands for PYthon based data structure to improve Dataset's InteGrity in Machine learning workflows.

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