https://github.com/rdemets/cell_ring_analysis-imagej

Macro to analyse cell density in rings
https://github.com/rdemets/cell_ring_analysis-imagej

Last synced: 9 days ago
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Macro to analyse cell density in rings

• Host: GitHub
• URL: https://github.com/rdemets/cell_ring_analysis-imagej
• Owner: rdemets
• License: gpl-3.0
• Created: 2026-06-10T11:47:28.000Z (about 1 month ago)
• Default Branch: main
• Last Pushed: 2026-06-10T11:53:53.000Z (about 1 month ago)
• Last Synced: 2026-06-10T13:21:57.693Z (about 1 month ago)
• Language: ImageJ Macro
• Size: 15.6 KB
• Stars: 0
• Watchers: 0
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

          
# Motivations

The aim of the macro is to analyse the density of smooth cells in channel 3, and to analyse the profile of the inner ring in channel 2 using channel 1 

All function used are available from the stable version of Fiji and MorpholibJ

## Requirements

This macro requires **IJPB-plugins** from the Fiji plugins updater.

## Updates history


v0.1.1 Added Continuity % based on Otsu