https://github.com/rdmpage/biostor-lite

Simple interface to BioStor
https://github.com/rdmpage/biostor-lite

Last synced: 6 days ago
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Simple interface to BioStor

• Host: GitHub
• URL: https://github.com/rdmpage/biostor-lite
• Owner: rdmpage
• Created: 2019-10-13T12:23:41.000Z (over 5 years ago)
• Default Branch: master
• Last Pushed: 2024-08-07T21:09:17.000Z (6 months ago)
• Last Synced: 2024-08-08T00:13:03.744Z (6 months ago)
• Language: JavaScript
• Size: 8.69 MB
• Stars: 2
• Watchers: 3
• Forks: 0
• Open Issues: 1
• Metadata Files:
  • Readme: README.md

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README

        
# biostor-lite

Simple interface to BioStor

## DNS

Type | Name | Content

-- | -- | --

CNAME | biostor.org | DNS Target from Heroku

CNAME | www | DNS Target from Heroku

## Elastic search

## IIIF

Based on @rogerhyam’s [IIIF proof of concept](https://github.com/rogerhyam/iiif_poc) I’ve implemented a IIIF viewer for BioStor content using [Universal Viewer](https://universalviewer.io) and the Internet Archive’s IIIF server.

To install Universal Viewer clone the respository, make sure you have node.js, bower, and grunt, then build the distribution:

1. Install the grunt command line interface (if you haven't already); on the command line, run:

         npm install -g grunt-cli

1. Install bower (if you haven't already)

        npm install -g bower

1. On the command line, go in to the `universalviewer` folder

1. Run

        npm install

        bower install

        grunt sync

1. Build the distribution build (i.e., files to add to your web server)

        grunt build

1. Put the files in the ```dist``` folder on your web site (e.g., in a folder called ```uv```)

1. Add a tweaked version of Roger’s ```viewer.php``` script from [iiif_poc](https://github.com/rogerhyam/iiif_poc) and use the InternetArchive IIIF server as the source of the IIIF manifest, e.g. [https://iiif.archivelab.org/iiif/biostor-244961/manifest.json](https://iiif.archivelab.org/iiif/biostor-244961/manifest.json).

Note that IA’s IIIF server seems a bit flaky, so your mileage may vary.

           

## Managing items

### Elasticsearch

Use [scroll search](https://www.elastic.co/guide/en/elasticsearch/reference/current/paginate-search-results.html#scroll-search-results) to get list of all ids. Note that this search requires multiple Elasticsearch queries, only the first includes the specific index, all subsequent queries are to the server.

### Internet Archive

https://archive.org/advancedsearch.php?q=collection%3A%28biostor%29&fl%5B%5D=identifier&sort%5B%5D=&sort%5B%5D=&sort%5B%5D=&rows=300000&page=1&output=json&callback=callback&save=yes#raw will get JSON list of all BioStor items in IA.