https://github.com/refgenie/refgenconf

A Python object for standardized reference genome assets.
https://github.com/refgenie/refgenconf

pythonapi reference-genome refgenie

Last synced: about 1 month ago
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A Python object for standardized reference genome assets.

• Host: GitHub
• URL: https://github.com/refgenie/refgenconf
• Owner: refgenie
• License: bsd-2-clause
• Created: 2019-05-14T20:27:09.000Z (over 5 years ago)
• Default Branch: master
• Last Pushed: 2024-10-10T14:09:38.000Z (3 months ago)
• Last Synced: 2024-11-10T19:56:29.648Z (2 months ago)
• Topics: pythonapi, reference-genome, refgenie
• Language: Python
• Homepage: http://refgenie.databio.org
• Size: 954 KB
• Stars: 3
• Watchers: 13
• Forks: 6
• Open Issues: 14
• Metadata Files:
  • Readme: README.md
  • License: LICENSE.txt

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README

        
# refgenconf

![Run pytests](https://github.com/refgenie/refgenconf/workflows/Run%20pytests/badge.svg)

[![codecov](https://codecov.io/gh/refgenie/refgenconf/branch/master/graph/badge.svg)](https://codecov.io/gh/refgenie/refgenconf)

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/refgenconf/README.html)

Configuration object for [refgenie](https://doi.org/10.1093/gigascience/giz149) *et al.*

Documentation for `refgenconf` can be found with the [primary documentation for refgenie](http://refgenie.databio.org).