https://github.com/renato145/fastai_scans

Fastai extension to work with 3d medical images
https://github.com/renato145/fastai_scans

Last synced: 3 months ago
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Fastai extension to work with 3d medical images

• Host: GitHub
• URL: https://github.com/renato145/fastai_scans
• Owner: renato145
• Created: 2019-01-11T23:10:33.000Z (almost 6 years ago)
• Default Branch: master
• Last Pushed: 2019-06-07T14:48:03.000Z (over 5 years ago)
• Last Synced: 2024-07-03T04:04:29.739Z (4 months ago)
• Language: Jupyter Notebook
• Size: 3.19 MB
• Stars: 42
• Watchers: 7
• Forks: 12
• Open Issues: 1
• Metadata Files:
  • Readme: README.md

Awesome Lists containing this project

• awesome-fastai - Fastai for Medical AI
• awesome-fastai - Fastai for Medical AI

README

        
# Fastai scans

Fastai extension to work with 3d medical images.

Work in progress...

## Notes:

- Data must be stored as a bcolz array to use the data loaders (http://bcolz.blosc.org/).

- To visualize display 3d volumes the method x.show3d() uses ipyvolume (http://ipyvolume.readthedocs.io/).

- Examples in notebooks folder using Brats dataset (https://www.med.upenn.edu/sbia/brats2018/data.html).