https://github.com/rformassspectrometry/msbackendmsp

Mass Spectrometry Data Backend for MSP Files
https://github.com/rformassspectrometry/msbackendmsp

infrastructure mass-spectrometry rstats

Last synced: about 1 month ago
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Mass Spectrometry Data Backend for MSP Files

• Host: GitHub
• URL: https://github.com/rformassspectrometry/msbackendmsp
• Owner: rformassspectrometry
• Created: 2020-04-16T20:11:51.000Z (over 4 years ago)
• Default Branch: main
• Last Pushed: 2024-09-27T12:39:52.000Z (3 months ago)
• Last Synced: 2024-10-25T04:14:42.759Z (about 2 months ago)
• Topics: infrastructure, mass-spectrometry, rstats
• Language: R
• Homepage: https://rformassspectrometry.github.io/MsBackendMsp/
• Size: 10.8 MB
• Stars: 5
• Watchers: 4
• Forks: 3
• Open Issues: 7
• Metadata Files:
  • Readme: README.md

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README

        
# Mass Spectrometry Data Backend for NIST MSP Files

[![Project Status: Active – The project has reached a stable, usable state and is being actively developed.](https://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/#active)

[![R-CMD-check-bioc](https://github.com/RforMassSpectrometry/MsBackendMsp/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/RforMassSpectrometry/MsBackendMsp/actions?query=workflow%3AR-CMD-check-bioc)

[![codecov](https://codecov.io/gh/rformassspectrometry/MsBackendMsp/branch/main/graph/badge.svg?token=RS145O5ER1)](https://codecov.io/gh/rformassspectrometry/MsBackendMsp)

[![license](https://img.shields.io/badge/license-Artistic--2.0-brightgreen.svg)](https://opensource.org/licenses/Artistic-2.0)

[![years in bioc](http://bioconductor.org/shields/years-in-bioc/MsBackendMsp.svg)](https://bioconductor.org/packages/release/bioc/html/MsBackendMsp.html)

[![Ranking by downloads](http://bioconductor.org/shields/downloads/release/MsBackendMsp.svg)](https://bioconductor.org/packages/stats/bioc/MsBackendMsp/)

[![build release](http://bioconductor.org/shields/build/release/bioc/MsBackendMsp.svg)](https://bioconductor.org/checkResults/release/bioc-LATEST/MsBackendMsp/)

[![build devel](http://bioconductor.org/shields/build/devel/bioc/MsBackendMsp.svg)](https://bioconductor.org/checkResults/devel/bioc-LATEST/MsBackendMsp/)

The `MsBackendMsp` package provides functionality to import and handle

MS/MS spectrum data from MSP files.

The package defines the `MsBackendMsp` backend which can be used to

import and use MS2 spectrum data from msp files with the

[Spectra](https://github.com/rformassspectrometry/Spectra) R package.

For more information see the package vignette or the package

[homepage](https://rformassspectrometry.github.io/MsBackendMsp).

# Installation

The package can be installed with

```r

install.packages("BiocManager")

BiocManager::install("MsBackendMsp")

```

# Contributions

Contributions are highly welcome and should follow the [contribution

guidelines](https://rformassspectrometry.github.io/RforMassSpectrometry/articles/RforMassSpectrometry.html#contributions).

Also, please check the coding style guidelines in the [RforMassSpectrometry

vignette](https://rformassspectrometry.github.io/RforMassSpectrometry/articles/RforMassSpectrometry.html).