https://github.com/richelbilderbeek/singularity_examples
Examples of how to use Singularity on Travis CI
https://github.com/richelbilderbeek/singularity_examples
singularity singularity-container
Last synced: about 1 year ago
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Examples of how to use Singularity on Travis CI
- Host: GitHub
- URL: https://github.com/richelbilderbeek/singularity_examples
- Owner: richelbilderbeek
- License: gpl-3.0
- Created: 2019-06-14T07:24:20.000Z (almost 7 years ago)
- Default Branch: master
- Last Pushed: 2023-08-31T09:24:30.000Z (over 2 years ago)
- Last Synced: 2025-02-12T12:57:28.040Z (about 1 year ago)
- Topics: singularity, singularity-container
- Language: Shell
- Homepage:
- Size: 34.2 KB
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
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README
# singularity_examples
My Singularity examples.
## One simple rule to learn Singularity
Find out the version you have access to, and read the
documentation of that version.
To see your version of Singularity:
```
singularity version
```
Where |Version
-----------------|-----------------------
Lubuntu Disco |`2.5.2-dist`
Travis CI Xenial |`2.5.0-HEAD.g50d254da5`
Peregrine |`3.2.1-1.el7`
## Examples
Description|Singularity version|Ubuntu version
-----------------------------------------------------|---|---
[1: lolcow](https://github.com/richelbilderbeek/singularity_example_1)|v3.2.1|16.04 (xenial)
[2: lolcow on cosmic](https://github.com/richelbilderbeek/singularity_example_2)|v3.2.1|18.10 (cosmic)
[3: cowsay](https://github.com/richelbilderbeek/singularity_example_3)|v3.2.1|18.10 (cosmic)
[4: NCBI tools](https://github.com/richelbilderbeek/singularity_example_4)|v3.2.1|18.10 (cosmic)
[5: lolcow on Ubuntu 19.04 (disco) (fails)](https://github.com/richelbilderbeek/singularity_example_5)|v3.2.1|19.04 (disco) [1]
[6: City of Thieves](https://github.com/richelbilderbeek/singularity_example_6)|v3.2.1|18.10 (cosmic)
[7: ndsmake](https://github.com/richelbilderbeek/singularity_example_7)|v3.2.1|18.10 (cosmic)
[8: Zork](https://github.com/richelbilderbeek/singularity_example_8)|v3.2.1|18.10 (cosmic)
[9: MXE](https://github.com/richelbilderbeek/singularity_example_9)|v3.2.1|19.10 (cosmic)
[10: BBBQ](https://github.com/richelbilderbeek/singularity_example_10)|v3.2.1|110.10 (cosmic)
* [1] does not work: will not upgrade from cosmic to disco
## Notes to self
### Why not to use `Richèl` as author name
When doing this:
```
%labels
AUTHOR Richèl J.C. Bilderbeek
```
The `è` gets turned to Unicode:
```
richel@sonic:~/GitHubs/singularity_example_3$ singularity inspect ubuntu_cowsay.simg
{
"AUTHOR": "Rich\u00e8l J.C. Bilderbeek",
```
## Links
* Singularity documentation: [https://sylabs.io/docs/](https://sylabs.io/docs/)
* Singularity v2.5 documentation: [https://sylabs.io/guides/2.5/user-guide/](https://sylabs.io/guides/2.5/user-guide/)