https://github.com/rlebre/orcid-extract-info

Script to extract personal information and publications of a given ORCID
https://github.com/rlebre/orcid-extract-info

Last synced: about 1 month ago
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Script to extract personal information and publications of a given ORCID

• Host: GitHub
• URL: https://github.com/rlebre/orcid-extract-info
• Owner: rlebre
• License: mit
• Created: 2017-12-14T11:17:55.000Z (almost 7 years ago)
• Default Branch: master
• Last Pushed: 2022-12-07T23:48:47.000Z (almost 2 years ago)
• Last Synced: 2023-03-03T19:50:43.078Z (over 1 year ago)
• Language: Python
• Size: 15.6 KB
• Stars: 4
• Watchers: 0
• Forks: 0
• Open Issues: 5
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# orcid-extract-info

Script to extract personal information and publications of a given ORCID

Note: Script will run a small server to receive access_token from ORCID API. Sometimes, ORCID API do not process the request. If it happens, just press Ctrl+C and run the script again.

## Building

```

pip install -r requirements.txt

```

## Run

```

$ python orcid-extract-data.py -h

usage: orcid-extract-data.py [-h] (-id ID | -i INPUTFILE)

                             [-s path/to/directory] [-o path/to/file.json]

                             [-csv path/to/file.csv]

Script that reads records from OrcID and outputs to a json file

optional arguments:

  -h, --help            show this help message and exit

  -id ID, --id ID       Provide the OrcID desired

  -i INPUTFILE, --inputfile INPUTFILE

                        Provide a file containing a list of the OrcIDs desired

                        (one per line)

  -s path/to/directory, --save_requests path/to/directory

                        Folder where to save the intermidiate request files

  -o path/to/file.json, --output path/to/file.json

                        JSON File where to save the simplified model. Default:

                        (current path)/export.json

  -csv path/to/file.csv, --output_csv path/to/file.csv

                        CSV File where to save the exported data. Default:

                        (current path)/export.csv

```

## Example

```

$ python orcid-extract-data.py -i input_ids -o new.json -s save_resquests

Starting...

Getting access token

Getting data

getting:  0000-0002-9164-0016

Identified 127 works

getting:  0000-0003-1176-552X

Identified 33 works

DONE!

Exported JSON:  new.json

Exported CSV:   export.csv

```