Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
https://github.com/robnewman/quilt
Notebooks with example code for specific Quilt data repositories
https://github.com/robnewman/quilt
jupyter-notebook python python3 quilt
Last synced: about 1 month ago
JSON representation
Notebooks with example code for specific Quilt data repositories
- Host: GitHub
- URL: https://github.com/robnewman/quilt
- Owner: robnewman
- Created: 2018-06-15T20:20:38.000Z (over 6 years ago)
- Default Branch: master
- Last Pushed: 2024-08-29T19:17:02.000Z (3 months ago)
- Last Synced: 2024-08-29T21:33:11.790Z (3 months ago)
- Topics: jupyter-notebook, python, python3, quilt
- Language: Jupyter Notebook
- Size: 69.3 KB
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
Awesome Lists containing this project
README
# Notebooks containing example code for use with Quilt data repositories
## Overview
Quilt provides versioned, reusable building blocks for analysis in the form of data packages. A data package may contain data of any type or any size.
Quilt does for data what package managers do for code: provide a centralized store of record.
[More information.](https://quiltdata.com/)
## About this repository
This repository contains example code for use with Quilt data repositories associated with my [public Quilt packages](https://quiltdata.com/package/robnewman/)
### Setting up
1. Build a virtual environment:
```bash
robnewman$ python3 -m venv ~/venv/quilt-py3
robnewman$ source ~/venv/quilt-py3
```
2. Install packages:
```bash
(quilt-py3) robnewman$ pip install -r REQUIREMENTS.txt
```
3. Set up a new kernel:
This is useful if you want to force Jupyter to use your virtual environment Python version and not a default from, for example, [Anaconda](https://anaconda.org/).
```bash
(quilt-py3) robnewman$ ipython kernel install --user --name=quilt
```
### Debugging
[Getting the jupyterlab-quilt extension installed: Yarn version skew](https://github.com/quiltdata/jupyterlab/issues/3)
## Further reading
* [YouTube: Introduction to Quilt: Manage data like code](https://www.youtube.com/watch?v=bKIV1GUVLPc)