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https://github.com/robsyme/minimal
https://github.com/robsyme/minimal
Last synced: 24 days ago
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- Host: GitHub
- URL: https://github.com/robsyme/minimal
- Owner: robsyme
- Created: 2024-05-03T19:41:17.000Z (6 months ago)
- Default Branch: main
- Last Pushed: 2024-05-03T19:47:55.000Z (6 months ago)
- Last Synced: 2024-05-03T20:59:21.498Z (6 months ago)
- Language: Nextflow
- Size: 158 KB
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
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README
## Introduction
**robsyme/minimal** is a minimal example workflow
You can run the pipeline using:
```bash
nextflow run robsyme/minimal \
-profile \
--input samplesheet.csv \
--outdir
```
## Citations
This pipeline uses code and infrastructure developed and maintained by the [nf-core](https://nf-co.re) community, reused here under the [MIT license](https://github.com/nf-core/tools/blob/master/LICENSE).
> **The nf-core framework for community-curated bioinformatics pipelines.**
>
> Philip Ewels, Alexander Peltzer, Sven Fillinger, Harshil Patel, Johannes Alneberg, Andreas Wilm, Maxime Ulysse Garcia, Paolo Di Tommaso & Sven Nahnsen.
>
> _Nat Biotechnol._ 2020 Feb 13. doi: [10.1038/s41587-020-0439-x](https://dx.doi.org/10.1038/s41587-020-0439-x).