https://github.com/robsyme/workflows-proteogenomics

Versioned, shareable and replicable workflows for proteogenomics.
https://github.com/robsyme/workflows-proteogenomics

Last synced: 24 days ago
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Versioned, shareable and replicable workflows for proteogenomics.

• Host: GitHub
• URL: https://github.com/robsyme/workflows-proteogenomics
• Owner: robsyme
• Created: 2014-11-25T17:05:39.000Z (almost 10 years ago)
• Default Branch: master
• Last Pushed: 2014-12-03T20:01:18.000Z (almost 10 years ago)
• Last Synced: 2023-04-10T14:49:50.202Z (over 1 year ago)
• Size: 11.5 MB
• Stars: 2
• Watchers: 2
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

        
Proteogenomics Workflows

========================

It is important that computational biology work is made with

documentation and replicability in mind. This helps not only

colleagues who need to replicate your work, but it also helps you

when it comes time to write up the work for a paper.

These are versioned, shareable and replicable proteogenomics workflows

that I have used during my PhD. This repository forms half of my

proteogenomics lab notebook. The other (private) half records exactly

what was run and which datasets were used. I'm not in a position to

share the details of the analysis at the moment, but I think that the

nextflow workflows and Docke images might be of use to other people.