https://github.com/rokkuran/notebooks

Miscellaneous analysis and simulation notebooks.
https://github.com/rokkuran/notebooks

ancestry identical-ancestors most-recent-common-ancestor simulation

Last synced: 7 days ago
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Miscellaneous analysis and simulation notebooks.

• Host: GitHub
• URL: https://github.com/rokkuran/notebooks
• Owner: rokkuran
• Created: 2019-03-10T00:12:51.000Z (over 5 years ago)
• Default Branch: master
• Last Pushed: 2019-05-07T05:44:35.000Z (over 5 years ago)
• Last Synced: 2024-08-02T15:19:11.676Z (3 months ago)
• Topics: ancestry, identical-ancestors, most-recent-common-ancestor, simulation
• Language: Jupyter Notebook
• Homepage:
• Size: 4.04 MB
• Stars: 2
• Watchers: 1
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

        
# Notebooks

Miscellaneous collection of analysis, simulation and investigation notebooks. List and details following, in no particular order.

## Common Ancestor Analysis/Simulation

**notebook**: ancestry.ipynb

- Population setup - have been keeping this static, but can be variable;

- Creation of networkx digraph for all generations that randomly assigns parents to child nodes in the family tree (present to past);

- Determination of Most Common Recent Ancestor (MCRA), implied common ancestors, no descendent nodes and indentical ancestors generation;

- Graph plot of ancestor generation map containing above information, split out by generations.

![Ancestry Generational Map Plot][ancestry_plot]

## Arboretum Game Model/Analysis

**notebook**: arboretum.ipynb

- Model setup for card game Arboretum: https://boardgamegeek.com/boardgame/140934/arboretum;

- **Very much work in progress** - still has a lot of early working;

- Randomly generate card layouts and identify associated allowed paths;

- Plot card layout using networkx with above information incorporated.

[ancestry_plot]: https://github.com/rokkuran/notebooks/blob/master/output/ancestry_generational_map_plot.png