https://github.com/rorynolan/autothresholdr

An R port of the "Auto Threshold" plugin for ImageJ for thresholding images.
https://github.com/rorynolan/autothresholdr

Last synced: 3 months ago
JSON representation

An R port of the "Auto Threshold" plugin for ImageJ for thresholding images.

• Host: GitHub
• URL: https://github.com/rorynolan/autothresholdr
• Owner: rorynolan
• License: gpl-3.0
• Created: 2016-11-02T11:14:55.000Z (about 8 years ago)
• Default Branch: master
• Last Pushed: 2023-12-13T05:31:09.000Z (11 months ago)
• Last Synced: 2024-07-10T19:41:08.439Z (4 months ago)
• Language: R
• Homepage: https://rorynolan.github.io/autothresholdr/
• Size: 26.4 MB
• Stars: 6
• Watchers: 1
• Forks: 4
• Open Issues: 0
• Metadata Files:
  • Readme: README.Rmd
  • License: LICENSE

Awesome Lists containing this project

README

        
---

output: github_document

---

```{r setup, include=FALSE}

knitr::opts_chunk$set(echo = TRUE, comment = "#>")

```

# autothresholdr  

Algorithms for automatically finding appropriate thresholds for numerical data, with special functions for thresholding images.

[![R-CMD-check](https://github.com/rorynolan/autothresholdr/workflows/R-CMD-check/badge.svg)](https://github.com/rorynolan/autothresholdr/actions)

[![CRAN_Status_Badge](http://www.r-pkg.org/badges/version/autothresholdr)](https://cran.r-project.org/package=autothresholdr)

![RStudio CRAN total downloads](http://cranlogs.r-pkg.org/badges/grand-total/autothresholdr)

[![RStudio CRAN monthly downloads](http://cranlogs.r-pkg.org/badges/autothresholdr)](https://cran.r-project.org/package=autothresholdr)

[![DOI](https://zenodo.org/badge/72632397.svg)](https://zenodo.org/badge/latestdoi/72632397)

[![Project Status: Active – The project has reached a stable, usable state and is being actively developed.](http://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/)

[![lifecycle](https://img.shields.io/badge/lifecycle-stable-brightgreen.svg)](https://lifecycle.r-lib.org/articles/stages.html)

## Installation

You can install the release version of `autothresholdr` from [CRAN](https://CRAN.R-project.org) with:

```{r, eval=FALSE}

install.packages("autothresholdr")

```

You can install the development version of `autothresholdr` from [GitHub](https://github.com/rorynolan/autothresholdr/) with:

```{r, eval=FALSE}

devtools::install_github("rorynolan/autothresholdr")

```

## How to use `autothresholdr`

To learn how to use the `autothresholdr`, consult the package website at https://rorynolan.github.io/autothresholdr/. 

## Contribution

Contributions to this package are welcome. The preferred method of contribution is through a github pull request. Feel free to contact me by creating an issue. Please note that this project is released with a [Contributor Code of Conduct](CONDUCT.md). By participating in this project you agree to abide by its terms.