https://github.com/rosettacommons/rosetta-dl

A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
https://github.com/rosettacommons/rosetta-dl

Last synced: 5 days ago
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A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons

• Host: GitHub
• URL: https://github.com/rosettacommons/rosetta-dl
• Owner: RosettaCommons
• License: other
• Created: 2021-06-25T20:46:10.000Z (over 3 years ago)
• Default Branch: main
• Last Pushed: 2022-10-12T12:51:23.000Z (about 2 years ago)
• Last Synced: 2024-06-05T19:27:29.822Z (5 months ago)
• Size: 16.6 KB
• Stars: 27
• Watchers: 7
• Forks: 6
• Open Issues: 1
• Metadata Files:
  • Readme: README.md
  • License: LICENSE.md

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README

        
# Rosetta-DL

A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the [Rosetta Commons](https://www.rosettacommons.org).

The packages listed below are provided by contributors to the Rosetta Commons for free for non-commercial use under the [Rosetta-DL Non-Commercial Licensing Agreement](https://github.com/RosettaCommons/Rosetta-DL/blob/main/LICENSE.md) or a more permissive license. 

For commercial licensing of this bundle, please contact the University of Washington CoMotion ([email protected]), which manages these packages on behalf of the Rosetta Commons member institutions. Licensing revenue supports the Rosetta Commons research community by funding conferences, workshops, summer interns and post-baccalaureate scholars, mini-grants, user support, documentation and code infrastructure and testing.

# Rosetta-DL packages

1. [RoseTTAFold](https://github.com/RosettaCommons/RoseTTAFold) - Protein folding - Code uses MIT license, data and weights use Rosetta-DL license

2. [DeepAb](https://github.com/RosettaCommons/DeepAb) - Antibody structure prediction - Code, data, and weights use Rosetta-DL license

3. [MaSIF](https://github.com/LPDI-EPFL/masif) - Molecular surface interaction fingerprints - MIT license

4. [trRosetta2](https://github.com/RosettaCommons/trRosetta2) - Protein folding by Baker lab in CASP14 - MIT license

5. [Protein-Seq-Des](https://github.com/ProteinDesignLab/protein_seq_des) - Protein sequence design from a learned potential - BSD3 license

6. [FvHallucinator](https://github.com/RosettaCommons/FvHallucinator) - Hallucination of antibody structures - Rosetta-DL license