https://github.com/russelljjarvis/neuroml-db-thinclient
https://github.com/russelljjarvis/neuroml-db-thinclient
Last synced: 3 months ago
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- Host: GitHub
- URL: https://github.com/russelljjarvis/neuroml-db-thinclient
- Owner: russelljjarvis
- Created: 2019-04-11T22:01:06.000Z (about 6 years ago)
- Default Branch: master
- Last Pushed: 2019-04-12T18:59:27.000Z (about 6 years ago)
- Last Synced: 2025-01-10T03:18:49.173Z (5 months ago)
- Language: Python
- Size: 87.9 KB
- Stars: 0
- Watchers: 3
- Forks: 0
- Open Issues: 0
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Metadata Files:
- Readme: README.md
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README
# NeuroML-DB_thinclient
Client side NeuroML-DB
https://github.com/scrook/neuroml-db/
neuroml-db contains some great pipelines for handling: realistic mutli-compartment NEURON, HBP and Allen protocals. The problem is that the implementation of these algorithms is designed to be intrinsically server side and data-base intensive. The database/webservice is also dependency heavy. This repository serves as a lighter (yet still not trivial) client side implementation of those pipelines and algorithms, found in NeuroML-DB.
The build environment needs python to be able to import the NEURON simulator. The attached Dockerfile, describes the appropriate build env, and makes cloning the exact environment (from Docker-hub) possible.