https://github.com/rustcodepro/fastscan
rust enabled fastascan
https://github.com/rustcodepro/fastscan
bioinformatics hpc-applications nanopore pacbio-data pacbio-sequencing
Last synced: 16 days ago
JSON representation
rust enabled fastascan
- Host: GitHub
- URL: https://github.com/rustcodepro/fastscan
- Owner: rustcodepro
- License: mit
- Created: 2025-11-02T18:32:10.000Z (3 months ago)
- Default Branch: main
- Last Pushed: 2025-11-06T16:27:08.000Z (3 months ago)
- Last Synced: 2025-12-13T17:54:40.954Z (about 2 months ago)
- Topics: bioinformatics, hpc-applications, nanopore, pacbio-data, pacbio-sequencing
- Language: Rust
- Homepage:
- Size: 26.4 KB
- Stars: 0
- Watchers: 0
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Awesome Lists containing this project
README
# fastascan
- rust enabled fastascan
- algorithm that it uses for binning: How it classifies bins:
```
let max_len = *self.lengths.iter().max().unwrap_or(&0);
let bin_size = (max_len as f64 / 10.0).max(1.0) as usize;
let num_bins = (max_len + bin_size - 1) / bin_size + 1;
```
```
cargo build
```
Gaurav Sablok \
codeprog@icloud.come