https://github.com/saeyslab/multinichenetr

MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data
https://github.com/saeyslab/multinichenetr

cell-cell-communication cell-cell-interaction differential-expression intercellular-communication intercellular-signaling ligand-receptor ligand-receptor-interaction ligand-target scrna-seq single-cell single-cell-rna-seq systems-biology

Last synced: 3 months ago
JSON representation

MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data

• Host: GitHub
• URL: https://github.com/saeyslab/multinichenetr
• Owner: saeyslab
• License: gpl-3.0
• Created: 2021-02-16T16:17:30.000Z (over 3 years ago)
• Default Branch: main
• Last Pushed: 2024-06-10T15:54:14.000Z (5 months ago)
• Last Synced: 2024-06-18T11:34:33.355Z (5 months ago)
• Topics: cell-cell-communication, cell-cell-interaction, differential-expression, intercellular-communication, intercellular-signaling, ligand-receptor, ligand-receptor-interaction, ligand-target, scrna-seq, single-cell, single-cell-rna-seq, systems-biology
• Language: HTML
• Homepage:
• Size: 619 MB
• Stars: 96
• Watchers: 3
• Forks: 14
• Open Issues: 4
• Metadata Files:
  • Readme: README.Rmd
  • License: LICENSE

Awesome Lists containing this project

• awesome-cell-cell-communication - multinichenetr - [R]- multinichenetr is a R package containing multiple functionalities to computationally study cell-cell communication from single-cell transcriptomics data with complex multi-sample, multi-condition designs. (Uncategorized / Uncategorized)