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https://github.com/saezlab/cyrface

Bridging Cytoscape with R
https://github.com/saezlab/cyrface

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Bridging Cytoscape with R

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Cyrface - Bridging Cytoscape with R

Cyrface establishes an interface between R and Cytoscape by using different Java-R libraries, e.g. Rserve, RCaller. Cyrface can be used as a Cytoscape plug-in, e.g. to run R commands within Cytoscape, or used as a library to allow your plug-in to connect to R.

https://saezlab.github.io/cyrface/

#### Reference
[Gonçalves, E., Saez-Rodriguez, J., 2013. Cyrface: An interface from Cytoscape to R that provides a user interface to R packages. F1000Res. 2.](http://dx.doi.org/10.12688/f1000research.2-192.v1)