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https://github.com/saezlab/cytocopter

CellNOptR in Cytoscape
https://github.com/saezlab/cytocopter

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CellNOptR in Cytoscape

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Cytocopter - CellNOptR in Cytoscape

This results in a point and click interface where users can run the same steps as they would using an R script without having to actually write any code. This version of Cytocopter is fully implemented in Java, but it remained consistent with the CellNOptR R package.

In case you need the R back-end version, please visit the `Rbackend` branch of this repository.

http://www.ebi.ac.uk/saezrodriguez/cno/cytocopter/