https://github.com/saketkc/pdfs

Curated writeups
https://github.com/saketkc/pdfs

Last synced: about 2 months ago
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Curated writeups

• Host: GitHub
• URL: https://github.com/saketkc/pdfs
• Owner: saketkc
• Created: 2018-02-27T02:43:21.000Z (about 7 years ago)
• Default Branch: master
• Last Pushed: 2023-02-05T04:49:49.000Z (over 2 years ago)
• Last Synced: 2025-01-31T15:41:06.745Z (3 months ago)
• Homepage: https://www.saket-choudhary.me/pdfs/
• Size: 53.9 MB
• Stars: 0
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

        
# pdfs

Curated writeups on various topics.

-   Predicting proteing coding boundaries using RNNs

    [pdf](./docs/rnn-cds-2017.pdf)

-   Pattern recognition in clinical data

    [pdf](./docs/pricd_masters_thesis.pdf)

-   Transcription Factor Binding Site Prediction and Phlyogenetic

    Footprinting: A Review

    [pdf](./docs/tfbs_prediction_and_phylogenetic_footprinting.pdf)

-   Golden Thompson via pinching

    inequality [pdf](./docs/Goldon_Thompson_Inequality_via_Pinching_Inequality.pdf)

-   Variational Autoencoders - Intuition and detailsVariational

    Autoencoders - Intuition and details [pdf](./docs/autoencoders.pdf)

-   \[In Progress\] Basics of Machine Learning

    [pdf](./docs/Machine_Learning_Basics.pdf)

-   Accurate detection of short and long active ORFs using Ribo-seq data [pdf](./docs/ribotricer_2019.pdf) 

-   Machine Learning for Histopathology Image Classification: To go deeper or not? [pdf](./docs/Strand_Histopath_Final_Report.pdf)

-   [In Progress] Higher Order Generalized SVD (HOGSVD) based alignment-free method for inferring orthologous genes across species [pdf](./docs/Higher_Order_Generalized_SVD_based_alignment_free_method_for_inferring_orthologous_genes_across_species.pdf)

-   [In Progress] HOGSVD and orthogonolization of U [pdf](./docs/HOGSVD_orthogonalization.pdf)