https://github.com/sciencegenome/bigg-slint-interface
a BIGG slint interface which will give you all the information associated with the metabolic model
https://github.com/sciencegenome/bigg-slint-interface
biggdatabase bioinformatics genome-analysis genome-annotation metabolic-models metabolic-pathways
Last synced: 2 months ago
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a BIGG slint interface which will give you all the information associated with the metabolic model
- Host: GitHub
- URL: https://github.com/sciencegenome/bigg-slint-interface
- Owner: IBCHgenomic
- License: mit
- Created: 2024-08-20T20:34:49.000Z (9 months ago)
- Default Branch: main
- Last Pushed: 2024-08-20T20:41:40.000Z (9 months ago)
- Last Synced: 2025-03-11T23:15:33.175Z (2 months ago)
- Topics: biggdatabase, bioinformatics, genome-analysis, genome-annotation, metabolic-models, metabolic-pathways
- Language: Slint
- Homepage:
- Size: 1.95 KB
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Awesome Lists containing this project
README
# BIGG-slint-interface
- a slint interface to the BIGG modeler database establishing all the links to the metanextx
- will give you all the associated information with the MetaNetX
- faster implementation of the regular expression plus awk so that it reads to filestream.io just like the std.io.
```
sh metabolome.sh
Please enter the metabolite:10fthf
FINISHED --2024-06-25 10:11:39--
Total wall clock time: 1.1s
Downloaded: 1 files, 72K in 0.6s (117 KB/s)
The seed compound is:cpd00201"
The InChlKey is: AUFGTPPARQZWDO-YPMHNXCESA-L
The CHEBI is:
11304"
15637"
19108"
19109"
57454"
698"
The metanextx is:
11304"
15637"
19108"
19109"
57454"
698"
The biocyc is: META:10-FORMYL-THF"
The kegg is:C00234"
The reactome is: R-ALL-419151"
R-ALL-5389850"
Thank you for using the metabolite and the slint userinterface
```
- if you want to run the shell version ucomment the line 25 and add run without slint.
Gaurav Sablok \
University of Potsdam \
Potsdam,Germany