https://github.com/sckott/mutant

mutation testing for R
https://github.com/sckott/mutant

mutation-testing r r-package rstats testing ttd

Last synced: about 1 month ago
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mutation testing for R

• Host: GitHub
• URL: https://github.com/sckott/mutant
• Owner: sckott
• License: other
• Created: 2017-01-04T19:34:49.000Z (almost 8 years ago)
• Default Branch: master
• Last Pushed: 2021-12-20T14:38:18.000Z (almost 3 years ago)
• Last Synced: 2024-11-01T21:51:05.134Z (about 1 month ago)
• Topics: mutation-testing, r, r-package, rstats, testing, ttd
• Language: R
• Homepage: https://sckott.github.io/mutant/
• Size: 85 KB
• Stars: 17
• Watchers: 5
• Forks: 2
• Open Issues: 7
• Metadata Files:
  • Readme: README.Rmd
  • License: LICENSE
  • Code of conduct: CODE_OF_CONDUCT.md

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• jimsghstars - sckott/mutant - mutation testing for R (R)

README

        
mutant

======

```{r echo=FALSE}

knitr::opts_chunk$set(

  comment = "#>",

  collapse = TRUE,

  warning = FALSE,

  message = FALSE

)

```

[![Project Status: Concept – Minimal or no implementation has been done yet, or the repository is only intended to be a limited example, demo, or proof-of-concept.](https://www.repostatus.org/badges/latest/concept.svg)](https://www.repostatus.org/#concept)

![R-CMD-check](https://github.com/sckott/mutant/workflows/R-CMD-check/badge.svg)

`mutant` - mutation testing

(wikipedia: [mutation testing](https://en.wikipedia.org/wiki/Mutation_testing) vs. [fuzzing](https://en.wikipedia.org/wiki/Fuzzing))

## info

- mutaters: in `mutaters.R`

  - currently only have: 

    - boolean replacement (TRUE -> FALSE, and vice versa)

    - binary operator replacement (e.g., > to >=)

## install

```{r eval=FALSE}

remotes::install_github("sckott/astr", "sckott/mutant")

```

## current workflow

As of this writing (2020-05-18) ...

```{r eval=FALSE}

# path to an R package with working tests in tests/

path <- "../randgeo/" 

## collect fxns into an environment

env <- collect_fxns(path)

ls.str(env)

## make pkg map for later

pkgmap <- make_pkg_map(path)

## parse fxns with getParseData

# fxns <- parse_fxns(env)

## mutate something

mut_fxns <- mutate(as.list(env))

# what fxn was mutated?

which(vapply(mut_fxns, function(x) attr(x, "mutated"), logical(1)))

## write a new package with test suite to a tempdir

new_fxns <- make_fxns(mut_fxns)

newpath <- write_mutated_pkg(pkg_path = path, fxns = new_fxns, map = pkgmap)

## run test suite & collect diagnostics

mutout <- mutation_test(newpath)

# mutout

dplyr::select(data.frame(mutout), file, context, test, nb, failed, skipped, error, warning, passed)

```

This will all be internal code however - only exposing probably a few functions to users to 

run mutation testing, do something with results, etc.

## To do

brainstorming high level steps:

1. map input package api

    - optionally map what test lines are linked to what code lines ([#10](https://github.com/sckott/mutant/issues/10))

2. generate mutants

    - each of these are full packages, which with a different mutation

3. put all mutants in a queue ([#2](https://github.com/sckott/mutant/issues/2))

4. test all mutants - pull jobs from the queue until all are done

5. collate results, write to disk

## Meta

* Please [report any issues or bugs](https://github.com/sckott/mutant/issues).

* License: MIT

* Get citation information for `mutant` in R doing `citation(package = 'mutant')`

* Please note that this project is released with a [Contributor Code of Conduct][coc]. By participating in this project you agree to abide by its terms.

[coc]: https://github.com/sckott/mutant/blob/master/CODE_OF_CONDUCT.md