https://github.com/seandavi/rnaseqbeginnertutorial

An introduction to RNA-seq file formats, quality control, and visualization targeted to a biologist audience
https://github.com/seandavi/rnaseqbeginnertutorial

bioinformatics education fastq genomics gtf tutorial

Last synced: 4 months ago
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An introduction to RNA-seq file formats, quality control, and visualization targeted to a biologist audience

• Host: GitHub
• URL: https://github.com/seandavi/rnaseqbeginnertutorial
• Owner: seandavi
• License: mit
• Created: 2014-02-18T01:58:18.000Z (over 11 years ago)
• Default Branch: master
• Last Pushed: 2018-03-28T18:19:05.000Z (over 7 years ago)
• Last Synced: 2025-04-09T06:16:22.938Z (6 months ago)
• Topics: bioinformatics, education, fastq, genomics, gtf, tutorial
• Homepage:
• Size: 5.89 MB
• Stars: 1
• Watchers: 3
• Forks: 2
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Awesome Lists containing this project

README

          
RNASeqBeginnerTutorial

======================

- [PDF version](RNASeqTutorial.Rmd)

- [Rmarkdown version](RNASeqTutorial.pdf)

This little "tutorial" is meant as a walkthrough (a bit dated now, but...) of the basics of RNA-seq, including describing file formats, quality control metrics, and how to visualize RNA-seq data in a genome viewer. The target audience is really the biologist who wants to learn a bit about the RNA-seq data that he or she is producing.