https://github.com/sgibb/talk-odense-20171127
Example files for talk in Odense 2017
https://github.com/sgibb/talk-odense-20171127
mass-spectrometry proteomics talk
Last synced: about 1 month ago
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Example files for talk in Odense 2017
- Host: GitHub
- URL: https://github.com/sgibb/talk-odense-20171127
- Owner: sgibb
- Created: 2017-11-23T14:39:49.000Z (over 7 years ago)
- Default Branch: master
- Last Pushed: 2017-11-26T22:30:54.000Z (over 7 years ago)
- Last Synced: 2025-02-14T12:40:50.190Z (3 months ago)
- Topics: mass-spectrometry, proteomics, talk
- Language: HTML
- Size: 14.7 MB
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
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README
# Topics
## Working with mzML files; Investigate Neutral Loss
- Loading LC-MS/MS data.
- Building TICs and BPI chromatogrammes.
- Investigating injection times and number of spectra per minute.
- Looking for characteristic or neutral-loss ions in spectra.
### Files
- [Example R file](01-neutral-loss.R).
- [Output](https://rawgit.com/sgibb/talk-odense-20171127/master/01-neutral-loss.html).
## Working with sequences
- Predicting isotopic envelopes and fragmentation spectra.
- In silico digestion of protein databases with proteases of interest.
### Files
- [Example R file](02-sequences.R).
- [Output](https://rawgit.com/sgibb/talk-odense-20171127/master/02-sequences.html).