https://github.com/shenlab-sinai/ngsplot

Quick mining and visualization of NGS data by integrating genomic databases
https://github.com/shenlab-sinai/ngsplot

Last synced: 3 days ago
JSON representation

Quick mining and visualization of NGS data by integrating genomic databases

• Host: GitHub
• URL: https://github.com/shenlab-sinai/ngsplot
• Owner: shenlab-sinai
• License: other
• Created: 2015-03-30T13:47:56.000Z (over 9 years ago)
• Default Branch: develop
• Last Pushed: 2023-05-05T19:54:55.000Z (over 1 year ago)
• Last Synced: 2024-09-28T00:41:58.031Z (about 2 months ago)
• Language: R
• Homepage:
• Size: 250 MB
• Stars: 252
• Watchers: 25
• Forks: 65
• Open Issues: 55
• Metadata Files:
  • Readme: README
  • Changelog: Changes
  • License: LICENSE

Awesome Lists containing this project

• AwesomeGenomics - ngsplot

README

        
###########################################################

ngs.plot: Quick mining and visualization of next-generation 

sequencing data by integrating genomic databases

Li Shen, [email protected] or [email protected]

Icahn School of Medicine at Mount Sinai

###########################################################

BRIEF:

------

The program options can be displayed when you type the program name (such as 

ngs.plot.r) without any argument. There are some toy examples under the 

"example" folder. Please also read "example/README.txt". To run those toy 

examples, you need to download the bam files -  example.bam.tar.gz (~180MB) 

from ngsplot's website. 

For detailed instructions, please refer to our online manual: 

https://github.com/shenlab-sinai/ngsplot

Enjoy!