https://github.com/shreyazh/geneglance

https://github.com/shreyazh/geneglance

Last synced: 17 days ago
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• Host: GitHub
• URL: https://github.com/shreyazh/geneglance
• Owner: shreyazh
• License: mit
• Created: 2024-11-28T03:00:12.000Z (2 months ago)
• Default Branch: main
• Last Pushed: 2024-11-28T03:44:37.000Z (2 months ago)
• Last Synced: 2024-11-28T04:19:42.056Z (2 months ago)
• Language: Python
• Size: 9.77 KB
• Stars: 0
• Watchers: 1
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# **GeneGlance**  

**Your Go-To Tool for DNA Sequence Insights**

---

## **About GeneGlance**

GeneGlance is a cutting-edge DNA sequence analysis application designed for researchers, bioinformatics enthusiasts, and curious minds. Whether you're studying genetic mutations, searching for motifs, or analyzing the structure of DNA, GeneGlance has you covered with intuitive tools and powerful capabilities—all wrapped in a sleek and interactive interface.

---

## **Key Features**

🌟 **Reverse Complement**: Quickly generate the reverse complement of any DNA sequence.  

🌟 **GC Content Calculator**: Analyze the GC content of DNA to understand structural stability.  

🌟 **Mutation Finder**: Identify mutations between an original and a mutated DNA sequence.  

🌟 **Motif Finder**: Locate specific patterns or motifs in your DNA sequence with precision.

---

## **How to Use**

### **1. Installation**

To get started, install the required dependencies:

```bash

pip install streamlit biopython

```

### **2. Launch the Application**

Run the app locally with:

```bash

streamlit run main.py

```

### **3. Navigate Between Tools**

- Enter your DNA sequence in the sidebar.  

- Use the navigation menu to switch between tools:

  - Reverse Complement

  - GC Content Calculator

  - Mutation Finder

  - Motif Finder

---

## **Example Workflow**

1. **Input DNA Sequence**:  

   Paste your DNA sequence (e.g., `ATGCGTACGTTAGC`) in the sidebar.  

2. **Analyze**:  

   - **Reverse Complement**: See the complementary strand in reverse order.  

   - **GC Content**: Get the GC percentage (e.g., 42.86%).  

   - **Mutation Finder**: Compare mutated sequence (e.g., `ATGCGGACGTTAGC`) to identify differences.  

   - **Motif Finder**: Search for patterns (e.g., `CGT` found at positions 3 and 8).  

3. **Results**:  

   Get instant results for your analysis!

---

## **Why GeneGlance?**

🔬 **Intuitive Design**: Built with a user-friendly interface powered by Streamlit.  

⚡ **Fast Processing**: Delivers results in real-time, perfect for quick insights.  

📈 **Extensible**: Ready for additional features like protein translation and data visualization.  

🌍 **Accessible**: No steep learning curve—just paste your sequence and analyze!

---

## **Upcoming Features**

- 🔮 Protein sequence translation.  

- 📊 Visualization of GC content distribution.  

- 📂 Support for file uploads (e.g., FASTA files).  

---

## **Contribute to GeneGlance**

GeneGlance is an open-source project! Feel free to contribute by improving features or fixing bugs.  

Fork the repository and start your journey with us!

---

## **Support**

If you encounter any issues or have feature suggestions, please reach out. We’d love to hear from you!

---

## **License**

This project is licensed under the MIT License.

---

## **Brand Vision**

With **GeneGlance**, dive deep into DNA analysis with ease and elegance.  

Turn insights into discoveries—one sequence at a time.  

👩‍🔬👨‍🔬 **Empowering Genetic Explorations, Simplified!** 🚀