https://github.com/signaturescience/fiphde

Forecasting Influenza in Support of Public Health Decision Making
https://github.com/signaturescience/fiphde

Last synced: 5 months ago
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Forecasting Influenza in Support of Public Health Decision Making

• Host: GitHub
• URL: https://github.com/signaturescience/fiphde
• Owner: signaturescience
• License: gpl-3.0
• Created: 2021-12-17T13:44:49.000Z (over 4 years ago)
• Default Branch: main
• Last Pushed: 2024-12-27T03:17:28.000Z (over 1 year ago)
• Last Synced: 2025-09-04T23:15:43.370Z (9 months ago)
• Language: R
• Homepage: https://signaturescience.github.io/fiphde/
• Size: 36.7 MB
• Stars: 3
• Watchers: 2
• Forks: 2
• Open Issues: 6
• Metadata Files:
  • Readme: README.Rmd
  • Changelog: NEWS.md
  • License: LICENSE.md
  • Citation: CITATION.cff

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README

          
---

output: github_document

---

```{r, include = FALSE}

knitr::opts_chunk$set(

  collapse = TRUE,

  comment = "#>",

  fig.path = "man/figures/README-",

  out.width = "100%"

)

```

# fiphde

[![R-CMD-check](https://github.com/signaturescience/fiphde/workflows/R-CMD-check/badge.svg)](https://github.com/signaturescience/fiphde/actions)

[![CRAN status](https://www.r-pkg.org/badges/version/fiphde)](https://CRAN.R-project.org/package=fiphde)

`fiphde`: **F**orecasting **I**nfluenza in Support of **P**ublic **H**ealth **DE**cision Making

## Motivation

`fiphde` was originally created to operationally forecast influenza hospitalizations during the 2021-22 and 2022-23 seasons of the [FluSight challenge](https://github.com/cdcepi/Flusight-forecast-data). The package includes functions for data retrieval, modeling, near-term forecasting, and forecast summarization. Functionality from `fiphde` has been implemented for other infectious disease forecasting, including the 2022-23 [DoD COVID-like illness forecasting challenge](https://github.com/cdcepi/DoD-CLI-forecast-data).

## Installation

To install `fiphde` from GitHub:

``` r

# install.packages("remotes")

remotes::install_github("signaturescience/fiphde", build_vignettes = TRUE)

```

## Usage

To get started, see the [package vignette](https://signaturescience.github.io/fiphde/articles/basic_usage.html):

```{r, eval=FALSE}

vignette("basic_usage", package="fiphde")

```