https://github.com/silask/warmmicrobiota
Code and supplementary data
https://github.com/silask/warmmicrobiota
Last synced: 3 months ago
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Code and supplementary data
- Host: GitHub
- URL: https://github.com/silask/warmmicrobiota
- Owner: SilasK
- Created: 2020-06-19T10:48:00.000Z (almost 5 years ago)
- Default Branch: master
- Last Pushed: 2021-08-17T14:47:55.000Z (almost 4 years ago)
- Last Synced: 2025-01-21T20:48:38.615Z (5 months ago)
- Language: Jupyter Notebook
- Size: 362 MB
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
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Metadata Files:
- Readme: README.md
Awesome Lists containing this project
README
# WarmMicrobiota
Code and supplementary data for Chevalier _et al._ "Warm Exposure Prevents Osteoporosis through the Gut Microbiota"
# Mice microbiota
Contains the processed data and scripts to generate the figures used in the paper.
The raw amplicon sequences were processed with a pipline based on DADA2 (https://github.com/SilasK/amplicon-seq-dada2) to optain OTU tables. The Statistical analysis is done with aldex2 (https://github.com/SilasK/microbiome-analysis). The config files are can be found in the subfolders.
# Correlations in human
Contains data and scripts for the corelation analyisis of the incidence of Hip fracture in different countires with different parameters (Temperature, Latitude, Calcium intake).