https://github.com/simonsfoundation/inferelator_ng

Inferelator refactor and generalization.
https://github.com/simonsfoundation/inferelator_ng

Last synced: about 1 year ago
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Inferelator refactor and generalization.

• Host: GitHub
• URL: https://github.com/simonsfoundation/inferelator_ng
• Owner: simonsfoundation
• License: bsd-2-clause
• Created: 2016-06-23T17:05:23.000Z (about 10 years ago)
• Default Branch: master
• Last Pushed: 2018-11-25T18:18:11.000Z (over 7 years ago)
• Last Synced: 2025-03-24T08:11:13.609Z (over 1 year ago)
• Language: Python
• Homepage:
• Size: 19.6 MB
• Stars: 7
• Watchers: 9
• Forks: 14
• Open Issues: 16
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

          
# inferelator_ng

[![Travis](https://api.travis-ci.org/simonsfoundation/inferelator_ng.svg?branch=master)](https://travis-ci.org/simonsfoundation/inferelator_ng)

[![codecov](https://codecov.io/gh/simonsfoundation/inferelator_ng/branch/master/graph/badge.svg)](https://codecov.io/gh/simonsfoundation/inferelator_ng)

The next generation of the inferelator codebase.

To install the python packages needed for the inferelator, run `pip install -r requirements.txt`

To install, run `python setup.py install`

To run a workflow, invote the corresponding workflow_runner script. For example, to run the B. Subitlis workflow, run `python bsubtilis_bbsr_workflow_runner.py`