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https://github.com/sirselim/guppy_parameter_optimiser
A small bash script that automates sweeping Guppy parameters in an attempt to optimise basecalling rate
https://github.com/sirselim/guppy_parameter_optimiser
basecalling gpu guppy nanopore-sequencing optimisation
Last synced: 18 days ago
JSON representation
A small bash script that automates sweeping Guppy parameters in an attempt to optimise basecalling rate
- Host: GitHub
- URL: https://github.com/sirselim/guppy_parameter_optimiser
- Owner: sirselim
- License: gpl-3.0
- Created: 2022-02-09T03:57:11.000Z (over 2 years ago)
- Default Branch: main
- Last Pushed: 2022-04-20T21:49:29.000Z (over 2 years ago)
- Last Synced: 2024-01-27T16:04:35.977Z (9 months ago)
- Topics: basecalling, gpu, guppy, nanopore-sequencing, optimisation
- Language: Shell
- Homepage: https://hackmd.io/@Miles/S12SKP115
- Size: 46.9 KB
- Stars: 31
- Watchers: 3
- Forks: 4
- Open Issues: 3