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https://github.com/sjackman/samskrit

Tools to manipulate SAM and BAM files
https://github.com/sjackman/samskrit

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Tools to manipulate SAM and BAM files

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Samskrit
========

Tools to manipulate SAM and BAM files

Samskrit = Sanskrit + SAM scripts. Get it? Funny!

Tools
=====

* [samskrit-identity](samskrit-identity):
Calculate the identity of each alignment
* [samskrit-swap](samskrit-swap):
Swap the roles of the query and target sequence

Author
======

Written by [Shaun Jackman](http://sjackman.ca).

Copyright
=========

Copyright 2013 Shaun Jackman

License GPLv2+: This program is free software; you can redistribute it
and/or modify it under the terms of the GNU General Public License as
published by the Free Software Foundation; either version 2 of the
License, or (at your option) any later version.