Ecosyste.ms: Awesome

An open API service indexing awesome lists of open source software.

Awesome Lists | Featured Topics | Projects

https://github.com/skgrange/gissr

Tools To Make Working With R and Spatial Data Easier
https://github.com/skgrange/gissr

Last synced: 3 months ago
JSON representation

Tools To Make Working With R and Spatial Data Easier

Awesome Lists containing this project

README

        

# **gissr**

[![Lifecycle: retired](https://img.shields.io/badge/lifecycle-retired-orange.svg)](https://lifecycle.r-lib.org/articles/stages.html#retired)

**gissr** is a collection of R functions which make working with spatial data easier.

## Retired note

As most spatial data and R users will be aware, the **rgdal**, **rgeos**, and **maptools** packages were retired in October 2023. This is because the developer of the packages retired and a new generation of spatial tools has emerged in the form of the **sf**, **terra**, and **stars** packages. Because **gissr** is mostly built upon the older packages (that have now been archived), **gissr** was retired on June 17, 2024. The development of **gissr**'s successor based on the **sf** and **terra** packages called [**sspatialr**](https://github.com/skgrange/sspatialr) is ongoing. For new projects, it is recommended that **sspatialr** is used rather than **gissr**.

## Installation

The development version:

```
# Install dependency
remotes::install_github("skgrange/threadr")

# Install gissr
remotes::install_github("skgrange/gissr")
```

## Background

R's spatial data analysis abilities are very well developed. Therefore, R can be an effective geographical information system (GIS). A key advantage of R in GIS applications is that the user can dip in and out of R's general string, numerical, and visualisation tools and apply them to spatial data.

However, the challenges I have with using R as a GIS are:

- Keeping track of the multiple packages which are used,

- the lack of consistency among these packages, and

- the lack of tidy outputs which other areas of the R ecosystem have been so good at developing.

To overcome these points, I have written wrappers for many geographical functions which generally begin `sp_` to do particular tasks and bundle all the dependencies together as a package. Some of these functions will likely be useful for others.

## Utility functions

- Easily read shapefiles, GPX, GeoJSON, KML, GML, TAB, and File Geodatabases with `sp_read`, a wrapper for `rgdal::readOGR`.
- Also check spatial files and system things with `sp_list_drivers`, `sp_list_layers`, and `sp_layer_info`.

- Transform projection systems with `sp_transform`.
- `sp_transform` can also force projections when a spatial object has none.
- `transform_coordinates` does a similar thing, but for data frames.

- Transform data frames (tables) to spatial points, lines, or polygons with `sp_from_data_frame`.

- Transform data frames with a well-known text (WKT) variable (or just a vector) to a spatial object with `sp_from_wkt`.

- Bind/combine different spatial objects with `sp_bind`.

- Unite spatial objects with `sp_unite` and do the opposite with `sp_disaggregate`.

- Calculate lengths or areas of spatial objects with `sp_area` and `sp_length`.

- Clip or crop a spatial object to a rectangular envelope with `sp_clip`.

- To filter objects by other polygons, use `[` subsetting (or `sp_filter`).

- Rectangular or elliptical polygons can be created with `sp_create_envelope` and `sp_ellipse` for this purpose too.

- Do simple transformations to spatial objects with `sp_move`, `sp_flip`, `sp_reflect`, and `sp_rotate`.

- Simplify spatial objects with `sp_simplify`.

- "Dissolve" polygons to make a single feature with `sp_dissolve_polygons`.

- "Punch" holes in polygons with `sp_punch`.

- Add positive or negative buffers with `sp_buffer`.

- Create enclosing polygons with `sp_convex_hull`.

- Find centroids of geometries with `sp_centroid`.

- "Promote" or "demote" Spatial\* to Spatial\*DataFrame, *i.e.* add or drop data slots for geometries with `sp_promote` and `sp_demote`.

- Return and reset geometry IDs with `sp_feature_ids` and `sp_reset_feature_ids`.

- Point-in-polygon tests with `sp_left_join`.

- Calculate distances among spatial objects with `sp_distance`.
- `distance_by_haversine` does the same thing, but with a different method, and for data frames.

- Fix issues with spatial objects with `sp_fix`. This function is a blatant wrap of [`cleangeo::clgeo_Clean`](https://github.com/eblondel/cleangeo). This function is a good piece of work so make sure you have a look at the **cleangeo** package.

- Parse vectors of degrees, minutes, and seconds into decimal degrees with `dms_to_decimal`.

- Sort/arrange points in a clockwise order with `sort_points`.

- Create Tessellation polygons with `sp_tessellation_polygons`.

- Export spatial objects to spatial data files with `write_gpx`, `write_geojson`, and `write_shapefile`.

- Transform spatial objects to data frames with `sp_fortify`.

### Raster functions

- Create a raster layer from spatial data with `ra_from_sp`.

- Filter/crop/mask a raster layer with a spatial polygon with `ra_mask`.

- Interpolate a raster layer/surface with `ra_interpolate`.

- Increase a raster's resolution with `ra_disaggregate`.

- Smooth a raster's values with `ra_focal`.

- Extract values from raster objects using spatial data types with `ra_drill` and then produce a "tidy data" version with `tidy_ra_drill`.

- Transform raster objects to data frames with `ra_fortify`.

- Bind or merge a number of raster layers together with `ra_bind`

### OpenStreetMap data importers

- A collection of `get_osm_*` functions to import data from OpenStreetMap.

## Things I want to do

- Develop a function which can read *n* features in a spatial data file. This will be helpful when large data files are encountered and system memory is too small to load the entire file at once.

- Get the interface between R and SpatiaLite sorted -- this can probably be left to [**sf**](https://github.com/r-spatial/sf) now.

- Concave hull function *i.e.* find minimum area polygon.

- Add support for WKB (well-known binary).

## See also

- [**sf**](https://github.com/r-spatial/sf)
- [**terra**](https://github.com/rspatial/terra)
- [**sspatialr**](https://github.com/skgrange/sspatialr)