https://github.com/slowikj/bioinf-cpg-methylation
https://github.com/slowikj/bioinf-cpg-methylation
Last synced: 9 months ago
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- Host: GitHub
- URL: https://github.com/slowikj/bioinf-cpg-methylation
- Owner: slowikj
- Created: 2019-11-23T21:23:07.000Z (about 6 years ago)
- Default Branch: master
- Last Pushed: 2019-11-24T16:50:15.000Z (about 6 years ago)
- Last Synced: 2025-01-20T14:50:27.840Z (10 months ago)
- Language: Jupyter Notebook
- Size: 22.5 MB
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
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Metadata Files:
- Readme: README.md
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README
# CpG islands and DNA Methylation analysis
The solution is written in Python using Jupyter-notebook and pybedtools package.
Input data can be found in [/data](https://github.com/slowikj/bioinf-CpG-methylation/tree/master/data)
Result files can be found in [/results](https://github.com/slowikj/bioinf-CpG-methylation/tree/master/results)
Complete solution (with a bar chart) can be found in [report.ipynb](https://github.com/slowikj/bioinf-CpG-methylation/blob/master/report.ipynb)