https://github.com/snakemake/snakemake-executor-plugin-cluster-generic

Generic cluster executor for Snakemake
https://github.com/snakemake/snakemake-executor-plugin-cluster-generic

Last synced: about 1 year ago
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Generic cluster executor for Snakemake

• Host: GitHub
• URL: https://github.com/snakemake/snakemake-executor-plugin-cluster-generic
• Owner: snakemake
• License: mit
• Created: 2023-09-05T19:26:35.000Z (almost 3 years ago)
• Default Branch: main
• Last Pushed: 2025-03-14T16:03:24.000Z (over 1 year ago)
• Last Synced: 2025-05-09T00:15:28.990Z (about 1 year ago)
• Language: Python
• Size: 59.6 KB
• Stars: 3
• Watchers: 1
• Forks: 8
• Open Issues: 5
• Metadata Files:
  • Readme: README.md
  • Changelog: CHANGELOG.md
  • License: LICENSE

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README

          
# snakemake-executor-plugin-cluster-generic

A generic Snakemake executor plugin for submission of jobs to cluster systems that provide a submission command that accepts the path to a job script (like PBS, LSF, SGE, ...).