https://github.com/snakemake/snakemake-storage-plugin-zenodo

A Snakemake storage plugin for zenodo
https://github.com/snakemake/snakemake-storage-plugin-zenodo

Last synced: 4 months ago
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A Snakemake storage plugin for zenodo

• Host: GitHub
• URL: https://github.com/snakemake/snakemake-storage-plugin-zenodo
• Owner: snakemake
• License: mit
• Created: 2023-12-01T09:02:00.000Z (over 2 years ago)
• Default Branch: main
• Last Pushed: 2025-03-24T13:30:27.000Z (over 1 year ago)
• Last Synced: 2025-12-07T11:42:57.517Z (7 months ago)
• Language: Python
• Size: 34.2 KB
• Stars: 3
• Watchers: 0
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • Changelog: CHANGELOG.md
  • License: LICENSE

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README

          
# Snakemake storage plugin: zenodo

A Snakemake storage plugin for reading from and writing to zenodo.org.

The plugin takes queries of the form `zenodo://record/121246/path/to/file.txt` for

downloading files (here from record `121246`), and 

`zenodo://deposition/121246/path/to/file.txt` for uploading files

to an existing deposition (i.e. an unpublished and therefore still writable record).