https://github.com/soda-inria/hazardous

Competing Risks and Survival Analysis
https://github.com/soda-inria/hazardous

competing-risks data-science gradient-boosting machine-learning survival-analysis

Last synced: 7 days ago
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Competing Risks and Survival Analysis

• Host: GitHub
• URL: https://github.com/soda-inria/hazardous
• Owner: soda-inria
• License: mit
• Created: 2023-05-15T15:47:25.000Z (over 1 year ago)
• Default Branch: main
• Last Pushed: 2024-10-31T21:23:30.000Z (13 days ago)
• Last Synced: 2024-10-31T22:22:53.421Z (13 days ago)
• Topics: competing-risks, data-science, gradient-boosting, machine-learning, survival-analysis
• Language: Python
• Homepage: https://soda-inria.github.io/hazardous/
• Size: 5.21 MB
• Stars: 55
• Watchers: 7
• Forks: 12
• Open Issues: 12
• Metadata Files:
  • Readme: README.md
  • Changelog: CHANGES.rst
  • License: LICENSE

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README

        
# HΛZΛRDOUS

Predictive Competing Risks and Survival Analysis.

[![Tests](https://github.com/soda-inria/hazardous/actions/workflows/test.yml/badge.svg)](https://github.com/soda-inria/hazardous/actions/workflows/test.yml)

## Installation and usage

XXX: the following will work only once the 0.1.0 release is out!

```

pip install hazardous

```

or

```

conda install -c conda-forge hazardous

```

Then browse the [online documentation](https://soda-inria.github.io/hazardous/)

and run the `examples/` to get started.

## Development and testing

Install in "editable" mode in your current Python env (after a standard installation to install the dependencies):

```

pip install flit

pip install . -v

pip install -e ".[dev]" --no-build-isolation -v

pre-commit install

```

Run the tests with nox to test in an environment that matches exactly on

specific CI build, for instance:

```

nox -p 3.11 -s test_latest_from_pypi -r

```

The `-r` flag makes it possible to reuse an existing env.

You can also install the test dependencies in the current env and use `pytest`

directly with arbitrary command line arguments:

```

pip install -e ".[test]" --no-build-isolation -v

pytest -vl -x -k test_name_pattern

```

## Building the doc

Using `nox`:

```

nox -s doc -r

```

or manually:

```

pip install -e ".[doc]" --no-build-isolation -v

cd doc

make html

```

The resulting html files are generated under the `doc/_build` folder.

## Building a release

```

pip install build

python -m build

ls dist/

```

TODO: make it possible to automate a release using GitHub Actions for a given tag.