https://github.com/ssi-dk/bifrost_run_launcher

https://github.com/ssi-dk/bifrost_run_launcher

Last synced: 3 days ago
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• Host: GitHub
• URL: https://github.com/ssi-dk/bifrost_run_launcher
• Owner: ssi-dk
• License: mit
• Created: 2020-07-02T13:19:48.000Z (over 4 years ago)
• Default Branch: main
• Last Pushed: 2024-11-07T13:13:36.000Z (8 days ago)
• Last Synced: 2024-11-07T14:23:44.046Z (8 days ago)
• Language: Python
• Size: 169 KB
• Stars: 0
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • Changelog: HISTORY.md
  • License: LICENSE

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README

        
# bifrost_run_launcher

This image is run given a directory of reads and a metadata.tsv which provides samples expected and 

provided species. The script will then create a sample object for all samples found and a run object 

containing all the sample objects. A script is then created based of the provided pre, per, and post

scripts that can are customized to each install. Running this script will then create 

sample_component objects as each sample will be ran against the provided components in the per 

script

## Programs: (see Dockerfile) 

```

```

## Summary of c run: (see pipeline.smk and config.yaml)

```

```