https://github.com/ssi-dk/bifrost_run_launcher
https://github.com/ssi-dk/bifrost_run_launcher
Last synced: about 2 months ago
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- Host: GitHub
- URL: https://github.com/ssi-dk/bifrost_run_launcher
- Owner: ssi-dk
- License: mit
- Created: 2020-07-02T13:19:48.000Z (over 5 years ago)
- Default Branch: main
- Last Pushed: 2025-02-17T10:54:46.000Z (10 months ago)
- Last Synced: 2025-02-17T11:34:37.372Z (10 months ago)
- Language: Python
- Size: 254 KB
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- Changelog: HISTORY.md
- License: LICENSE
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README
# bifrost_run_launcher
This image is run given a directory of reads and a metadata.tsv which provides samples expected and
provided species. The script will then create a sample object for all samples found and a run object
containing all the sample objects. A script is then created based of the provided pre, per, and post
scripts that can are customized to each install. Running this script will then create
sample_component objects as each sample will be ran against the provided components in the per
script
## Programs: (see Dockerfile)
```
```
## Summary of c run: (see pipeline.smk and config.yaml)
```
```