https://github.com/starsareintherose/msamarker

generate marker sequence based on Gblocks & trim msa based on marker sequence
https://github.com/starsareintherose/msamarker

Last synced: 23 days ago
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generate marker sequence based on Gblocks & trim msa based on marker sequence

• Host: GitHub
• URL: https://github.com/starsareintherose/msamarker
• Owner: starsareintherose
• Created: 2024-05-07T04:32:15.000Z (8 months ago)
• Default Branch: master
• Last Pushed: 2024-05-07T04:53:30.000Z (8 months ago)
• Last Synced: 2024-05-08T05:37:22.388Z (8 months ago)
• Language: C++
• Size: 2.93 KB
• Stars: 0
• Watchers: 1
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

        

- Author: Guoyi Zhang

- License: GPLv2

## gene_marker

Generate fasta file which `m` means selected position by Gblocks from Gblocks html report file.

Usage:

```

gene_marker  

```

## trim_marker

Trim the multi-sequence-alignment based on the marker which `m` indicates selected position.

Usage:

```

trim_marker   

```